RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PLA2G4AP47712 749 aa17.08■□□□□ 0.33
EFNB1-201ENST00000204961 GABPB1Q06547 395 aaPredicted RBP17.08■□□□□ 0.33
EFNB1-201ENST00000204961 DZIP1Q86YF9 867 aaKnown RBP17.08■□□□□ 0.33
EFNB1-201ENST00000204961 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.33
EFNB1-201ENST00000204961 SRPRBQ9Y5M8 271 aaKnown RBP17.08■□□□□ 0.33
EFNB1-201ENST00000204961 OAS2P29728 719 aaKnown RBP17.08■□□□□ 0.32
EFNB1-201ENST00000204961 MECOMQ03112 1051 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
EFNB1-201ENST00000204961 TIGD1Q96MW7 591 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 CCDC175P0C221 793 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 KRT9P35527 623 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 MORC3Q14149 939 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 PTPROQ16827 1216 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 CCDC178Q5BJE1 867 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 CTR9Q6PD62 1173 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 CLEC10AQ8IUN9 316 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 TMEM139Q8IV31 216 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 MLKLQ8NB16 471 aa17.08■□□□□ 0.32
EFNB1-201ENST00000204961 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
EFNB1-201ENST00000204961 LMAN1P49257 510 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 KLK7P49862 253 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 ZNF384Q8TF68 577 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 CCDC102AQ96A19 550 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
EFNB1-201ENST00000204961 BPIFA3Q9BQP9 254 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 TRIM34Q9BYJ4 488 aa17.07■□□□□ 0.32
EFNB1-201ENST00000204961 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.07■□□□□ 0.32
EFNB1-201ENST00000204961 KIF5CO60282 957 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 TADA3O75528 432 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 SSBP05455 408 aaKnown RBP eCLIP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 STAT6P42226 847 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 PLCD1P51178 756 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 CYP27A1Q02318 531 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 FOXP1Q9H334 677 aaPredicted RBP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 CCDC66A2RUB6 948 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 N4BP1O75113 896 aaKnown RBP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 LETM2Q2VYF4 491 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 GSPT2Q8IYD1 628 aaKnown RBP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 TGFBRAP1Q8WUH2 860 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 KANSL2Q9H9L4 492 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 KRT31Q15323 416 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 GRIK5Q16478 980 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
EFNB1-201ENST00000204961 ANKRD13CQ8N6S4 541 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
EFNB1-201ENST00000204961 ABCC12Q96J65 1359 aa17.05■□□□□ 0.32
EFNB1-201ENST00000204961 MACROD2A1Z1Q3 448 aa17.05■□□□□ 0.32
EFNB1-201ENST00000204961 TNNT3P45378 269 aaPredicted RBP17.05■□□□□ 0.32
EFNB1-201ENST00000204961 L2HGDHQ9H9P8 463 aa17.05■□□□□ 0.32
EFNB1-201ENST00000204961 CDHR2Q9BYE9 1310 aa17.05■□□□□ 0.32
EFNB1-201ENST00000204961 NKRFO15226 690 aaKnown RBP eCLIP17.05■□□□□ 0.32
EFNB1-201ENST00000204961 TRIM47Q96LD4 638 aa17.05■□□□□ 0.32
EFNB1-201ENST00000204961 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
EFNB1-201ENST00000204961 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
EFNB1-201ENST00000204961 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 TPM1P09493 284 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 JAKMIP3Q5VZ66 844 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 MARCH10Q8NA82 808 aaPredicted RBP17.04■□□□□ 0.32
EFNB1-201ENST00000204961 ENOX1Q8TC92 643 aaKnown RBP17.04■□□□□ 0.32
EFNB1-201ENST00000204961 KAT14Q9H8E8 782 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 MYH2Q9UKX2 1941 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 FAM205AQ6ZU69 1335 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 CAMTA2O94983 1202 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 PMS1P54277 932 aaKnown RBP17.04■□□□□ 0.32
EFNB1-201ENST00000204961 CHMP4BP1P59074 171 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 TBC1D9BQ66K14 1250 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 DYMQ7RTS9 669 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 CERS3Q8IU89 383 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 SRRTQ9BXP5 876 aaKnown RBP17.04■□□□□ 0.32
EFNB1-201ENST00000204961 TMEM60Q9H2L4 133 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 ARFGAP3Q9NP61 516 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 VPS18Q9P253 973 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 IDEP14735 1019 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 IL17AQ16552 155 aa17.04■□□□□ 0.32
EFNB1-201ENST00000204961 TAF1P21675 1872 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 UBA7P41226 1012 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 PRCPP42785 496 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 PICALMQ13492 652 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 NR1I3Q14994 352 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 SEC23AQ15436 765 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 MTRQ99707 1265 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 XDHP47989 1333 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 GYPCP04921 128 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 H2AFXP16104 143 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms