RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 VPS54Q9P1Q0 977 aa18.03■□□□□ 0.48
LAPTM4A-201ENST00000175091 PI4KBQ9UBF8 816 aa18.03■□□□□ 0.48
LAPTM4A-201ENST00000175091 SCG2P13521 617 aa18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 PFKFB3Q16875 520 aaPredicted RBP18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 ANO1Q5XXA6 986 aa18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 RASGRP2Q7LDG7 609 aa18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 METTL16Q86W50 562 aaKnown RBP18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 KLHL34Q8N239 644 aa18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
LAPTM4A-201ENST00000175091 CXCL9Q07325 125 aa18.02■□□□□ 0.47
LAPTM4A-201ENST00000175091 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.47
LAPTM4A-201ENST00000175091 OGFOD1Q8N543 542 aa18.02■□□□□ 0.47
LAPTM4A-201ENST00000175091 CCDC17Q96LX7 622 aa18.02■□□□□ 0.47
LAPTM4A-201ENST00000175091 STK38Q15208 465 aa18.01■□□□□ 0.47
LAPTM4A-201ENST00000175091 MTMR14Q8NCE2 650 aa18.01■□□□□ 0.47
LAPTM4A-201ENST00000175091 LZTS2Q9BRK4 669 aa18.01■□□□□ 0.47
LAPTM4A-201ENST00000175091 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
LAPTM4A-201ENST00000175091 BCS1LQ9Y276 419 aa18.01■□□□□ 0.47
LAPTM4A-201ENST00000175091 CYTH3O43739 400 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 LETM1O95202 739 aaPredicted RBP18■□□□□ 0.47
LAPTM4A-201ENST00000175091 SLURP2P0DP57 97 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 XRCC6P12956 609 aaKnown RBP eCLIP18■□□□□ 0.47
LAPTM4A-201ENST00000175091 ME1P48163 572 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 NR5A1Q13285 461 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 DLGAP5Q15398 846 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 NPY5RQ15761 445 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 CLEC10AQ8IUN9 316 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 OXER1Q8TDS5 423 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 JDP2Q8WYK2 163 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 TMOD2Q9NZR1 351 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 UTRNP46939 3433 aa18■□□□□ 0.47
LAPTM4A-201ENST00000175091 SPTLC2O15270 562 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 TTLL1O95922 423 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 PARP1P09874 1014 aaKnown RBP17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 SNHG28P0DPA3 235 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 KRT2P35908 639 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 SF3A1Q15459 793 aaKnown RBP17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 SPDYE2Q495Y8 402 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 CIAPIN1Q6FI81 312 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 TATDN1Q6P1N9 297 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 ZSCAN29Q8IWY8 852 aaPredicted RBP17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 DACT1Q9NYF0 836 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 A0A1W2PQ27 194 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 A0A1W2PQ64 194 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 A0A1W2PQD8 194 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 PDHBP11177 359 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 SLC39A14Q15043 492 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 PTPAQ15257 358 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 ADALQ6DHV7 355 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 FOXP4Q8IVH2 680 aaPredicted RBP17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 LRRC47Q8N1G4 583 aaKnown RBP17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 ZBED3Q96IU2 234 aaPredicted RBP17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 NUP62CLQ9H1M0 184 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 MTMR7Q9Y216 660 aa17.99■□□□□ 0.47
LAPTM4A-201ENST00000175091 CNTNAP1P78357 1384 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 NR1I2O75469 434 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 GOLGA8HP0CJ92 632 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 TOB1P50616 345 aaPredicted RBP17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 RILPL1Q5EBL4 403 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 PPP4R3BQ5MIZ7 849 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 NLGN2Q8NFZ4 835 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 TNFRSF25Q93038 417 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 GOLPH3LQ9H4A5 285 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 SH3GLB2Q9NR46 395 aa17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 ZNF70Q9UC06 446 aaPredicted RBP17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 DICER1Q9UPY3 1922 aaKnown RBP17.98■□□□□ 0.47
LAPTM4A-201ENST00000175091 CLRN2A0PK11 232 aa17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 KLRF2D3W0D1 207 aa17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 PPP6R2O75170 966 aa17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 SMARCA1P28370 1054 aa17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 EIF6P56537 245 aaKnown RBP17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 USP17L2Q6R6M4 530 aa17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 CCAR1Q8IX12 1150 aaKnown RBP17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 CLSTN2Q9H4D0 955 aa17.97■□□□□ 0.47
LAPTM4A-201ENST00000175091 USP17L5A8MUK1 530 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 MPHOSPH10O00566 681 aaKnown RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 RASSF7Q02833 373 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 CERKLQ49MI3 558 aaPredicted RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 FKBP1CQ5VVH2 108 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 MRPS27Q92552 414 aaKnown RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 CSRNP1Q96S65 589 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 TRIM34Q9BYJ4 488 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 TCP10L2B9ZVM9 353 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 AXDND1Q5T1B0 1012 aaPredicted RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 RBM43Q6ZSC3 357 aaKnown RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 FAM177A1Q8N128 213 aaPredicted RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 ENGASEQ8NFI3 743 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 FAM151AQ8WW52 585 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 PIBF1Q8WXW3 757 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 TSPY26PQ9H489 355 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
LAPTM4A-201ENST00000175091 MMP14P50281 582 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms