RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 RASGRP2Q7LDG7 609 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 SLC44A5Q8NCS7 719 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 KCND1Q9NSA2 647 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 STX8Q9UNK0 236 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 PRPF3O43395 683 aaKnown RBP9.4□□□□□ -0.9
CDC27-201ENST00000066544 FILIP1LQ4L180 1135 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 ZNF569Q5MCW4 686 aa9.4□□□□□ -0.9
CDC27-201ENST00000066544 CCDC175P0C221 793 aa9.4□□□□□ -0.91
CDC27-201ENST00000066544 GOLGA8HP0CJ92 632 aa9.4□□□□□ -0.91
CDC27-201ENST00000066544 KCNJ6P48051 423 aa9.4□□□□□ -0.91
CDC27-201ENST00000066544 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.91
CDC27-201ENST00000066544 DCP1AQ9NPI6 582 aaPredicted RBP9.4□□□□□ -0.91
CDC27-201ENST00000066544 TFAP4Q01664 338 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 DIXDC1Q155Q3 683 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 NUP88Q99567 741 aaPredicted RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 XDHP47989 1333 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 TRIM49BA6NDI0 452 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 TERF2Q15554 542 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 TBC1D9BQ66K14 1250 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 DZIP1Q86YF9 867 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 BAZ2AQ9UIF9 1905 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 RNF225M0QZC1 329 aaPredicted RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 SCG2P13521 617 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 RPS8P62241 208 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 SAP30BPQ9UHR5 308 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 FHOD1Q9Y613 1164 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 TAF1P21675 1872 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 ERCC5P28715 1186 aaPredicted RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 USP5P45974 858 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 UBE4AQ14139 1066 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 NPY5RQ15761 445 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 USP17L1Q7RTZ2 530 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 NBPF5PQ86XG9 351 aaPredicted RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 TRIML1Q8N9V2 468 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 IQUBQ8NA54 791 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 NSUN4Q96CB9 384 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 CRNKL1Q9BZJ0 848 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 TFR2Q9UP52 801 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 A0A1B0GTH6 734 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 HIBADHP31937 336 aaKnown RBP9.39□□□□□ -0.91
CDC27-201ENST00000066544 NT5DC1Q5TFE4 455 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 AK7Q96M32 723 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 SLF1Q9BQI6 1058 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
CDC27-201ENST00000066544 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 ERCC3P19447 782 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 GYS2P54840 703 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 MTRQ99707 1265 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 MKNK2Q9HBH9 465 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 KRT31Q15323 416 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 FAM98CQ17RN3 349 aaKnown RBP9.38□□□□□ -0.91
CDC27-201ENST00000066544 HEATR3Q7Z4Q2 680 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 ADD3Q9UEY8 706 aaKnown RBP9.38□□□□□ -0.91
CDC27-201ENST00000066544 FAM205AQ6ZU69 1335 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 PLA2G4AP47712 749 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 IL17AQ16552 155 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 FERMT2Q96AC1 680 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 NOL10Q9BSC4 688 aaKnown RBP9.38□□□□□ -0.91
CDC27-201ENST00000066544 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 LRP6O75581 1613 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 COL4A1P02462 1669 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 ITGB4P16144 1822 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 MYH3P11055 1940 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 GABPB1Q06547 395 aaPredicted RBP9.38□□□□□ -0.91
CDC27-201ENST00000066544 INF2Q27J81 1249 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 APTXQ7Z2E3 356 aaKnown RBP9.38□□□□□ -0.91
CDC27-201ENST00000066544 LINC00116Q8NCU8 138 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 NELFBQ8WX92 580 aa9.38□□□□□ -0.91
CDC27-201ENST00000066544 TPM1P09493 284 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 RHOXF2BP0C7M4 288 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 STAT6P42226 847 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 NLRP3Q96P20 1036 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 RHOXF2Q9BQY4 288 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 PARD6BQ9BYG5 372 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 ZNF804BA4D1E1 1349 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 CCDC194A0A1B0GVG4 234 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 EFCAB8A8MWE9 144 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 KIF5CO60282 957 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 GYPCP04921 128 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 KRT9P35527 623 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
CDC27-201ENST00000066544 BSDC1Q9NW68 430 aaPredicted RBP9.37□□□□□ -0.91
CDC27-201ENST00000066544 ANKIB1Q9P2G1 1089 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 SLC35F6Q8N357 371 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 GSDMAQ96QA5 445 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 BRIP1Q9BX63 1249 aa9.37□□□□□ -0.91
CDC27-201ENST00000066544 ANAPC4Q9UJX5 808 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms