RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 HPCAL4Q9UM19 191 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 GDAQ9Y2T3 454 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 CYP27A1Q02318 531 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 FOXP1Q9H334 677 aaPredicted RBP22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 GREM2Q9H772 168 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 V9GY48 417 aaPredicted RBP22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 ITGA6P23229 1130 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 MNAT1P51948 309 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 USP14P54578 494 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 JAKMIP2Q96AA8 810 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 KAT14Q9H8E8 782 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 DUSP10Q9Y6W6 482 aa22.62■■□□□ 1.21
PPP1R3F-201ENST00000055335 TTC26A0AVF1 554 aa22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 PPARAQ07869 468 aa22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 CRACR2BQ8N4Y2 399 aaPredicted RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 STRBPQ96SI9 672 aaKnown RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 EPB41L4AQ9HCS5 686 aaPredicted RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 TACC3Q9Y6A5 838 aa22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 SMIM22K7EJ46 135 aa22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 IPO7O95373 1038 aaKnown RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 EIF5P55010 431 aaKnown RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 TTF1Q15361 905 aaPredicted RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 SND1Q7KZF4 910 aaKnown RBP eCLIP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 BCAS4Q8TDM0 211 aa22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 LUC7L2Q9Y383 392 aaKnown RBP22.61■■□□□ 1.21
PPP1R3F-201ENST00000055335 MCM7P33993 719 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 TUBB2AQ13885 445 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 CDKAL1Q5VV42 579 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 TUBB2BQ9BVA1 445 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 PBX1P40424 430 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 SLC7A5Q01650 507 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 AKNAD1Q5T1N1 836 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 FANCBQ8NB91 859 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 SLC4A4Q9Y6R1 1079 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 NFAT5O94916 1531 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 GOLGA6BA6NDN3 693 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 PAK1Q13153 545 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 FBXW10Q5XX13 1052 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 TADA2BQ86TJ2 420 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 SGMS1Q86VZ5 419 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 SELENOOQ9BVL4 669 aa22.6■■□□□ 1.21
PPP1R3F-201ENST00000055335 EBAG9O00559 213 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 IDEP14735 1019 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 ERLIN2O94905 339 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 ERCC3P19447 782 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 PTGDRQ13258 359 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 ANKLE2Q86XL3 938 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 ZNF654Q8IZM8 581 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 REXO2Q9Y3B8 237 aaKnown RBP22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 TCIRG1Q13488 830 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 CTCFLQ8NI51 663 aaPredicted RBP22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 COG1Q8WTW3 980 aa22.59■■□□□ 1.21
PPP1R3F-201ENST00000055335 XBP1P17861 261 aa22.58■■□□□ 1.21
PPP1R3F-201ENST00000055335 AMPD2Q01433 879 aa22.58■■□□□ 1.21
PPP1R3F-201ENST00000055335 SMCR8Q8TEV9 937 aaPredicted RBP22.58■■□□□ 1.21
PPP1R3F-201ENST00000055335 CCDC51Q96ER9 411 aa22.58■■□□□ 1.21
PPP1R3F-201ENST00000055335 WDR19Q8NEZ3 1342 aa22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 H0YHG0 523 aa22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 TRIM21P19474 475 aaKnown RBP22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 CXCR5P32302 372 aa22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 LIFRP42702 1097 aa22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 EZH2Q15910 746 aaKnown RBP22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 GSDMAQ96QA5 445 aa22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 SMARCAL1Q9NZC9 954 aa22.58■■□□□ 1.2
PPP1R3F-201ENST00000055335 ZEB2O60315 1214 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 KCTD16Q68DU8 428 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 OR8K1Q8NGG5 319 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 MTMR7Q9Y216 660 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 GNGT1P63211 74 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 TCP11X2Q5H9J9 407 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 LMO7Q8WWI1 1683 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 PATL2C9JE40 543 aaKnown RBP22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 ATP1A2P50993 1020 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 TUBB4BP68371 445 aa22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 ZNF579Q8NAF0 562 aaKnown RBP22.57■■□□□ 1.2
PPP1R3F-201ENST00000055335 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 EXOC5O00471 708 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 EFCAB13Q8IY85 973 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 RUFY1Q96T51 708 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 LACRTQ9GZZ8 138 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 KRT2P35908 639 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 WDR93Q6P2C0 686 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 TRAPPC11Q7Z392 1133 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 SDR42E1Q8WUS8 393 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 RRP36Q96EU6 259 aaKnown RBP22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 FAM169AQ9Y6X4 670 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 PIK3AP1Q6ZUJ8 805 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 SPATA20Q8TB22 786 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 HDAC7Q8WUI4 952 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 KRT23Q9C075 422 aa22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 AATFQ9NY61 560 aaKnown RBP eCLIP22.56■■□□□ 1.2
PPP1R3F-201ENST00000055335 PDE2AO00408 941 aaPredicted RBP22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 FAM107BQ9H098 131 aa22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 CDHR2Q9BYE9 1310 aa22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 RPS6KA5O75582 802 aa22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 PRPF6O94906 941 aaKnown RBP22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 TUBBP07437 444 aa22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 GUCY2CP25092 1073 aa22.55■■□□□ 1.2
PPP1R3F-201ENST00000055335 UBE3CQ15386 1083 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms