RNA–Protein interactions for RNA: ENST00000053243.5

TNFRSF17-201, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-201ENST00000053243 LARGE2Q8N3Y3 721 aa7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 NCOA7Q8NI08 942 aa7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 SYAP1Q96A49 352 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 STRBPQ96SI9 672 aaKnown RBP7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 PODXL2Q9NZ53 605 aa7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 DENND2AQ9ULE3 1009 aa7.53□□□□□ -1.2
TNFRSF17-201ENST00000053243 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.2
TNFRSF17-201ENST00000053243 PATL2C9JE40 543 aaKnown RBP7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 ZNF213O14771 459 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 IDH1O75874 414 aaKnown RBP7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 PCP11498 1178 aaKnown RBP7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 RFC4P35249 363 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 RCAN1P53805 252 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 RPS8P62241 208 aaKnown RBP7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 DPYDQ12882 1025 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 USP4Q13107 963 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 CRY2Q49AN0 593 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 CAVIN4Q5BKX8 364 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 ATL3Q6DD88 541 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 NAA16Q6N069 864 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 GIMAP6Q6P9H5 292 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 PI16Q6UXB8 463 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 FBXO33Q7Z6M2 555 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 SIX5Q8N196 739 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 AIDAQ96BJ3 306 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 TMEM87BQ96K49 555 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 ZSCAN16Q9H4T2 348 aaPredicted RBP7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 CNNM2Q9H8M5 875 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 WWC3Q9ULE0 1092 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 MINPP1Q9UNW1 487 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 MYH1P12882 1939 aa7.52□□□□□ -1.21
TNFRSF17-201ENST00000053243 DHX16O60231 1041 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 PRPF40AO75400 957 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 AVPP01185 164 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 NCLP19338 710 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 TM4SF1P30408 202 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 ATP1A2P50993 1020 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 UBE2HP62256 183 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 GRAPQ13588 217 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 COL9A3Q14050 684 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 LARP1BQ659C4 914 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 TMC4Q7Z404 712 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 RALYLQ86SE5 291 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 NSUN7Q8NE18 718 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 GRAPLQ8TC17 118 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 FAM200AQ8TCP9 573 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 GPT2Q8TD30 523 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 BRF1Q92994 677 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 NACAP1Q9BZK3 213 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 QTRT2Q9H974 415 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 TMPRSS4Q9NRS4 437 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 SRP68Q9UHB9 627 aaKnown RBP7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 ANAPC4Q9UJX5 808 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 LEMD3Q9Y2U8 911 aa7.51□□□□□ -1.21
TNFRSF17-201ENST00000053243 FAM177BA6PVY3 158 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 PLSCR1O15162 318 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 PRC1O43663 620 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 LETM1O95202 739 aaPredicted RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 PDIA3P30101 505 aaKnown RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 HOXA10P31260 410 aaPredicted RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 LIFRP42702 1097 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 WDR4P57081 412 aaKnown RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 ANTXR2P58335 489 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 ERVK-9P63128 1117 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 KRT85P78386 507 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 FGD1P98174 961 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 SCRN1Q12765 414 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 TRDNQ13061 729 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 NFIXQ14938 502 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 ZNF772Q68DY9 489 aaPredicted RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 PHLDB3Q6NSJ2 640 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 SGMS1Q86VZ5 419 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 CERS3Q8IU89 383 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 IFNL3Q8IZI9 196 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 MAGEB6Q8N7X4 407 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 NECAB1Q8N987 351 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 CNBD1Q8NA66 436 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 STAG1Q8WVM7 1258 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 CELF1Q92879 486 aaKnown RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 FAM84BQ96KN1 310 aaPredicted RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 KRT23Q9C075 422 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 SCAND2PQ9GZW5 306 aaPredicted RBP7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 GRPEL1Q9HAV7 217 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 LRRC4BQ9NT99 713 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 XDHP47989 1333 aa7.5□□□□□ -1.21
TNFRSF17-201ENST00000053243 KLRG2A4D1S0 409 aaPredicted RBP7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 GSG1L2A8MUP6 293 aa7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 ST8SIA5O15466 376 aa7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 MBD4O95243 580 aa7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 ZIC2O95409 532 aaPredicted RBP7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 GYS1P13807 737 aa7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 TIMP2P16035 220 aa7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 RBM6P78332 1123 aaKnown RBP7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 ZSCAN23Q3MJ62 389 aa7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 PPP1R26Q5T8A7 1209 aaPredicted RBP7.49□□□□□ -1.21
TNFRSF17-201ENST00000053243 TTLL5Q6EMB2 1281 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms