RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Islr2Q5RKR3 745 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Exoc3Q6KAR6 755 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Sept9Q80UG5 583 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Q8C6G1 249 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Bst2Q8R2Q8 172 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Stx17Q9D0I4 301 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kcnq5Q9JK45 933 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Azi2Q9QYP6 405 aa10.54□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Zfpm1O35615 995 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Parp1P11103 1013 aaKnown RBP10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ccdc189Q6NZQ0 333 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Phf23Q8BSN5 401 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ccdc113Q8C5T8 377 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 CerkQ8K4Q7 531 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ctage5Q8R311 779 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 4930548H24RikQ9D496 437 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Tfap4Q9JIZ5 338 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ankrd35E9Q9D8 996 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Hspa1lP16627 641 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Fam178bQ24JP3 464 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Tom1l2Q5SRX1 507 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Kiaa0319Q5SZV5 1081 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Sestd1Q80UK0 696 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ankrd13aQ80UP5 588 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 RalylQ8BTF8 293 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Dclk3Q8BWQ5 790 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Amhr2Q8K592 568 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Tcof1O08784 1320 aaKnown RBP10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 ChkbO55229 394 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Nbr1P97432 988 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Rbm12b2Q66JV4 834 aaKnown RBP10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ddx31Q6NZQ2 687 aaKnown RBP10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ccdc57Q6PHN1 1016 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Nme8Q715T0 586 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ublcp1Q8BGR9 318 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Hic2Q9JLZ6 619 aaKnown RBP10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Qser1A2BIE1 1698 aa10.53□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Pnpla7A2AJ88 1352 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Phldb3E9QAF4 648 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Carmil3Q3UFQ8 1375 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Gbp4Q61107 620 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Maip1Q8BHE8 291 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ccdc14Q8K2J4 934 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Enox2Q8R0Z2 598 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Ifih1Q8R5F7 1025 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Arl8aQ8VEH3 186 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Telo2Q9DC40 840 aaKnown RBP10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Capn12Q9ER56 720 aa10.52□□□□□ -0.72
Ldlr-202ENSMUST00000213114 Cdk5rap2Q8K389 1822 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 P4ha1Q60715 534 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Traf3ip3Q8C0G2 513 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Trmt112Q9DCG9 125 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Trpm1Q2TV84 1622 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Aox4Q3TYQ9 1336 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 MeiocA2AG06 965 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Zfp213E9QAW0 468 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cyp3a25O09158 503 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Psmc2P46471 433 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ccpg1Q640L3 753 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Dpp8Q80YA7 892 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Yars2Q8BYL4 472 aaKnown RBP10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Trim59Q922Y2 403 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Btn2a2A4QPC6 514 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Apol10bG3X9K7 334 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cetn3O35648 167 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 XpcP51612 930 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tubb4bP68372 445 aaKnown RBP10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Slfnl1Q8BHW9 410 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Alx1Q8C8B0 326 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 McamQ8R2Y2 648 aaKnown RBP10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Klhl40Q9D783 621 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Usp32F8VPZ3 1604 aa10.52□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cps1Q8C196 1500 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Enc1O35709 589 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nmt2O70311 529 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Parp2O88554 559 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Fkbp3Q62446 224 aaKnown RBP10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 RragaQ80X95 313 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Mfap3Q922T2 349 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Trmt44Q9D2Q2 713 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sept14Q9DA97 430 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nr2e3Q9QXZ7 395 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rims2Q9EQZ7 1530 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 A0A1W2P6Q8 802 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm9048A0A1W2P7H4 802 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 A0A1W2P7Z8 802 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm9046A0A1W2P855 802 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Nom1Q3UFM5 854 aaKnown RBP10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm5935Q497S0 212 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Pcdhb14Q6PB90 796 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Haus7Q8BKT8 364 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Trip6Q9Z1Y4 480 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm38392E9Q2A2 434 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rgs9O54828 675 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Chmp6P0C0A3 200 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rpl13P47963 211 aaKnown RBP10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sh3bp1P55194 680 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 MaeaQ4VC33 396 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 LrmpQ60664 539 aa10.51□□□□□ -0.73
Ldlr-202ENSMUST00000213114 KhnynQ80U38 671 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms