RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Myef2Q8C854 591 aaKnown RBP17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Pcdha12Q91Y18 950 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Txnrd1Q9JMH6 613 aa17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Lmo7E9PYF4 1699 aaKnown RBP17.15■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 AceP09470 1312 aa17.14■□□□□ 0.34
Pcdha9-201ENSMUST00000115659 Gucy1b3O54865 620 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ercc5P35689 1170 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ncoa4Q5U4H9 625 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Rbm41Q8JZV4 413 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 A0A1W2P6Q8 802 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm9048A0A1W2P7H4 802 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 A0A1W2P7Z8 802 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm9046A0A1W2P855 802 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Nedd9O35177 833 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Nr1i2O54915 431 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Eif6O55135 245 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Cct6aP80317 531 aaKnown RBP17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 MarsQ68FL6 902 aaKnown RBP17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Slc26a7Q8R2Z3 656 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 SyncQ9EPM5 470 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Tex13c2A0A0G2JGA3 530 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Stox1B2RQL2 990 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ccdc110Q3V125 848 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 HomezQ80W88 542 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ciao1Q99KN2 339 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ttll7A4Q9F0 912 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Pkp1P97350 728 aaKnown RBP17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ano8Q6PB70 1060 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 RbsnQ80Y56 783 aa17.14■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Slc12a2P55012 1205 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Efcab8Q8C9R9 203 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Mfap3Q922T2 349 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Pprc1Q6NZN1 1644 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Uhrf1bp1lA2RSJ4 1457 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Adgrl1Q80TR1 1466 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Trpm2Q91YD4 1506 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Mroh9G5E8L9 891 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Tspyl1O88852 379 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Mis12Q9CY25 206 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Syap1Q9D5V6 365 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Kif24Q6NWW5 1356 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ugt1a5B2RT14 529 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Apol11aE9PZG0 334 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Atp6v1aP50516 617 aaKnown RBP17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Vgll3P85442 326 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Slc44a1Q6X893 653 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Trim60Q8VI40 466 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Vmn2r68L7N2B3 851 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Pde11aP0C1Q2 933 aa17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Surf6P70279 355 aaKnown RBP17.13■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Krt19P19001 403 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Bach1P97302 739 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Cacna2d2Q6PHS9 1154 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Rassf10Q8BL43 508 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Dnaaf2Q8BPI1 814 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Caps2Q8BUG5 550 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Cd209bQ8CJ91 325 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gpr108Q91WD0 569 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Dctpp1Q9QY93 170 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 RpgrQ9R0X5 1001 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Arhgef11Q68FM7 1552 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 YwhaeP62259 255 aaKnown RBP17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Eya3P97480 510 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Krt14Q61781 484 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Mroh7A2AVR2 1279 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ccdc125Q5U465 500 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Map3k12Q60700 888 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Asap2Q7SIG6 958 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 CactinQ9CS00 772 aaKnown RBP17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Aox2Q5SGK3 1345 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Pbrm1Q8BSQ9 1634 aaKnown RBP17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Tlr7P58681 1050 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Clasp2Q8BRT1 1286 aaKnown RBP17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Scyl2Q8CFE4 930 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Kif2cQ922S8 721 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Zcchc8Q9CYA6 709 aaKnown RBP17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Clic4Q9QYB1 253 aa17.12■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Ftl1P29391 183 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Copb1Q9JIF7 953 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Sap30bpQ02614 308 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Trim21Q62191 470 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Bzw2Q91VK1 419 aaKnown RBP17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 CaluO35887 315 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Rps8P62242 208 aaKnown RBP17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Mknk2Q8CDB0 459 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 FliiQ9JJ28 1271 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Abcc12Q80WJ6 1366 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm38392E9Q2A2 434 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Rad51bO35719 350 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Evi5P97366 809 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Oxr1Q4KMM3 866 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Tbx22Q8K402 517 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gm4340L7N2C4 268 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Samsn1P57725 372 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Nom1Q3UFM5 854 aaKnown RBP17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Gkap1Q9JMB0 366 aa17.11■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 H2afzP0C0S6 128 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Arl1P61211 181 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 H2afvQ3THW5 128 aa17.1■□□□□ 0.33
Pcdha9-201ENSMUST00000115659 Krt9Q6RHW0 743 aa17.1■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms