RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Parp14Q2EMV9 1817 aa8.34□□□□□ -1.07
Bdnf-204ENSMUST00000111044 CidebO70303 219 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tcp1P11983 556 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ercc5P35689 1170 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Exosc10P56960 887 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Fam207aP58468 219 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Bcl2l13P59017 434 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tmem232Q5K6N0 675 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ddx3yQ62095 658 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ppp4r3aQ6P2K6 820 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Acad11Q80XL6 779 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Vps37dQ810I0 261 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cnot10Q8BH15 744 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Spata2Q8K004 515 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Mmgt1Q8K273 131 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Alg1Q921Q3 482 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Dnajc10Q9DC23 793 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Net1Q9Z206 595 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cdc27A2A6Q5 825 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Clcn6O35454 870 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Dnm2P39054 870 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tmed8Q3UHI4 326 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pex1Q5BL07 1284 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Adam1aQ60813 791 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 PolnQ7TQ07 864 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 F13a1Q8BH61 732 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 3830417A13RikQ8BQJ2 303 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cyp2d12Q8BVD2 504 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Arhgap18Q8K0Q5 663 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tut1Q8R3F9 869 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 EpgnQ924X1 152 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Fam133bQ9CVI2 245 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cul5Q9D5V5 780 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ddx20Q9JJY4 825 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tex13c2A0A0G2JGA3 530 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gm20425E9Q035 978 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 CflarO35732 481 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tpp1O89023 562 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ets1P27577 440 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tmem165P52875 323 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Fhdc1Q3ULZ2 1149 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Drc1Q3USS3 753 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Swap70Q6A028 585 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ncapg2Q6DFV1 1138 aa8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sec62Q8BU14 398 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Knop1Q9Z2Q2 478 aaKnown RBP8.33□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gm5580A0A0N4SVP8 411 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 SrprbP47758 269 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Trim80Q3V061 624 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Trpc6Q61143 930 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Rgl2Q61193 778 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 RragbQ6NTA4 374 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 GopcQ8BH60 463 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Golim4Q8BXA1 655 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sash3Q8K352 380 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Dhx58Q99J87 678 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ascc1Q9D8Z1 356 aaKnown RBP8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Plekho1Q9JIY0 408 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ankrd2Q9WV06 328 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gm10378F6XQQ1 160 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pth1rP41593 591 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Arhgap44Q5SSM3 814 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 CtcfQ61164 736 aaKnown RBP8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Clec16aQ80U30 1036 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Hirip3Q8BLH7 601 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Sugp2Q8CH09 1067 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ero1aQ8R180 464 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Vps16Q920Q4 839 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gucy1a3Q9ERL9 691 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Copb1Q9JIF7 953 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 4932429P05RikA2ADI4 785 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Acad12D3Z7X0 555 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Kif23E9Q5G3 953 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Traf5P70191 558 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Arhgef16Q3U5C8 713 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tmprss11aQ3UQ41 389 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ccdc160Q3UYG1 323 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Brsk2Q69Z98 735 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Lrrcc1Q69ZB0 1026 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Rps6ka6Q7TPS0 764 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Gimap6Q8K349 305 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Znf131Q8K3J5 619 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 ParnQ8VDG3 624 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Slc40a1Q9JHI9 570 aa8.32□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Itga9B8JK39 1036 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cyb5d1Q5NCY3 228 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Hand2Q61039 217 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cnga2Q62398 664 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Ctdspl2Q8BG15 465 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Psma8Q9CWH6 250 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Luc7lQ9CYI4 371 aaKnown RBP8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Cfap57Q9D180 1249 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Nop56Q9D6Z1 580 aaKnown RBP8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 MefvQ9JJ26 767 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Coro1cQ9WUM4 474 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Scgb2b18A0A087WPA9 112 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Pde8aO88502 823 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Serpina1bP22599 413 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Tex35Q14BK3 207 aa8.31□□□□□ -1.08
Bdnf-204ENSMUST00000111044 Rap1gap2Q5SVL6 712 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 19.6 ms