RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Tmem60Q8K174 133 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Nod2Q8K3Z0 1020 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Ifi35Q9D8C4 286 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Akap8Q9DBR0 687 aaKnown RBP11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Gucy1a2F8VQK3 730 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Alppl2P24823 529 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Aco1P28271 889 aaKnown RBP11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Usp5P56399 858 aaKnown RBP11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Slc9a1Q61165 820 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Cnnm4Q69ZF7 771 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Trim29Q8R2Q0 587 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Txnrd3Q99MD6 652 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 A0A1W2P6Q8 802 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Gm9048A0A1W2P7H4 802 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 A0A1W2P7Z8 802 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Gm9046A0A1W2P855 802 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Btn2a2A4QPC6 514 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Tbc1d2B1AVH7 922 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Tpm3-rs7D3Z2H9 248 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Grm4Q68EF4 912 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Arid5bQ8BM75 1188 aaKnown RBP11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 LRWD1Q8BUI3 648 aaKnown RBP11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Nat10Q8K224 1024 aaKnown RBP11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Xrcc4Q924T3 326 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Scrn1Q9CZC8 414 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 CluhQ5SW19 1315 aa11.79□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Plxnb2B2RXS4 1842 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 A0A0U1RNP2 1173 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Ces3aQ63880 571 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 GnptabQ69ZN6 1235 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Tacc1Q6Y685 774 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Lca5Q80ST9 704 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Trmt2aQ8BNV1 574 aaKnown RBP11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Ces3bQ8VCU1 571 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Klrc1Q9Z202 244 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Zfp853A0A1D5RM95 733 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 A0A1L1SQF0 893 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Gm5624F6ZZG8 207 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 LtkP08923 888 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Cdh15P33146 784 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Tdo2P48776 406 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Atp6v1aP50516 617 aaKnown RBP11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Eef2P58252 858 aaKnown RBP11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Atp2b4Q6Q477 1205 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Ube2oQ6ZPJ3 1288 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Frmpd4A2AFR3 1320 aa11.78□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Chrna5Q2MKA5 467 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 PsdQ5DTT2 1024 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Mdh1bQ5F204 500 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Znf18Q810A1 556 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Cep128Q8BI22 1102 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 E2f4Q8R0K9 410 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Rbm19Q8R3C6 952 aaKnown RBP11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Wdr64Q9D565 1086 aa11.77□□□□□ -0.52
Ccdc87-201ENSMUST00000088653 Gm21969J3QJZ1 289 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Kifc2O08672 792 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Nfil3O08750 462 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 LdhaP06151 332 aaKnown RBP11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Mboat4P0C7A3 435 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Sdc2P43407 202 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Clic6Q8BHB9 596 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Ccdc94Q9D6J3 314 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Trmt112Q9DCG9 125 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Tfap4Q9JIZ5 338 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Mtmr2Q9Z2D1 643 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Col5a2Q3U962 1497 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Ces1aE9PYP1 563 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Arid4aF8VPQ2 1261 aaKnown RBP11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Klhdc9Q3USL1 350 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Mxd3Q80US8 206 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Enox1Q8BHR2 643 aaKnown RBP11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Baiap2l1Q9DBJ3 514 aa11.77□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Wdr78E9PYY5 807 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Vcam1P29533 739 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 LtbrP50284 415 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Gcnt1Q09324 428 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Tbc1d2bQ3U0J8 965 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Brms1Q99N20 246 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 A430078G23RikE9Q7Y4 484 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 PnnO35691 725 aaKnown RBP11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Kcna1P16388 495 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Rasa2P58069 847 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Anks1aP59672 1150 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Kcnd1Q03719 651 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Rhpn1Q61085 643 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Scnn1aQ61180 699 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Galnt17Q7TT15 598 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Dlg1Q811D0 905 aaKnown RBP11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Kctd3Q8BFX3 815 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Skor1Q8BX46 964 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Col23a1Q8K4G2 532 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 LpxnQ99N69 386 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Myoz2Q9JJW5 264 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Itgb4A2A863 1818 aa11.76□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Dhx8A2A4P0 1244 aaKnown RBP11.75□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Pabpc1lA2A5N3 607 aaKnown RBP11.75□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Cdkn1cP49919 348 aa11.75□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Nek1P51954 1203 aa11.75□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Insm1Q63ZV0 521 aa11.75□□□□□ -0.53
Ccdc87-201ENSMUST00000088653 Asnsd1Q8BFS9 627 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms