RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Traf1P39428 409 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Csrnp3P59055 597 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Sfi1Q3UZY0 1216 aaKnown RBP14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Tacc1Q6Y685 774 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Aoc2Q812C9 757 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Tmx2Q9D710 295 aaKnown RBP14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Trmt112Q9DCG9 125 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Sh2b2Q9JID9 621 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Clip2Q9Z0H8 1047 aa14.36□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Scn3aA2ASI5 1947 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Rabgap1A2AWA9 1064 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Tmigd3G3X8R9 209 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Parp2O88554 559 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Pdia3P27773 505 aaKnown RBP14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Grm1P97772 1199 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Tekt3Q6X6Z7 490 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Fbxo28Q8BIG4 368 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Serpinb13Q8CDC0 389 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 DaglbQ91WC9 669 aa14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Pdcd6ipQ9WU78 869 aaKnown RBP14.35□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Ripor3A1L3T7 938 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Flot1O08917 428 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 NfkbieO54910 364 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Nmt2O70311 529 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 LtkP08923 888 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Slc4a3P16283 1227 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Alppl2P24823 529 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Igfbp4P47879 254 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Cnnm2Q3TWN3 875 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 ErmnQ5EBJ4 281 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Ecm1Q61508 559 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Slc44a1Q6X893 653 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Fam205cQ80YD3 371 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Top1mtQ8R4U6 593 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 BaatQ91X34 420 aa14.34□□□□□ -0.11
Ccdc28a-202ENSMUST00000080860 Phldb3E9QAF4 648 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gm3138K7N754 218 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Prl7a2O54831 253 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 MecomP14404 1042 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Nf2P46662 596 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Mtx1P47802 317 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Fads2p1Q0VAX3 487 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Stxbp3Q60770 592 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 ImmtQ8CAQ8 757 aaKnown RBP14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Zswim3Q8CFL8 695 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Ppp6r3Q922D4 844 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 PfkpQ9WUA3 784 aaKnown RBP14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 ArcQ9WV31 396 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Fkbp1bQ9Z2I2 108 aa14.33□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Anapc15-psA0A140T8L6 141 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Magea4F2Z493 315 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Map7O88735 730 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Sec23aQ01405 765 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Scg2Q03517 617 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Atp13a3Q5XF89 1219 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Hand2Q61039 217 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 E4f1Q8CCE9 783 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Riox2Q8CD15 465 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Trim32Q8CH72 655 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Nup133Q8R0G9 1155 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cnot6lQ8VEG6 555 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Nr3c2Q8VII8 978 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 KnstrnQ9D9Z1 312 aaKnown RBP14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tmem47Q9JJG6 181 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tmod4Q9JLH8 345 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tjp3Q9QXY1 905 aa14.32□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Plxnb3Q9QY40 1902 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Fbxl16A2RT62 479 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gm8882E9Q7E4 283 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gm9857F7CXR1 130 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cyp2c37P56654 490 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Nucb1Q02819 459 aaKnown RBP14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gm10392Q3V3I3 114 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Eme2Q56A04 373 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Ifit2Q64112 472 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cyp2c54Q6XVG2 490 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tcp11l1Q8BTG3 509 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Fubp1Q91WJ8 651 aaKnown RBP14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cyp2c50Q91X77 490 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pcdhb22Q91XZ8 794 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tomm22Q9CPQ3 142 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Mad2l2Q9D752 211 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Zbtb43Q9DAI4 467 aa14.31□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Sbf2E9PXF8 1872 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Ugt1a5B2RT14 529 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cntnap3E9PY62 1287 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cyp2d34L7N463 504 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 AoahO35298 574 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Ercc3P49135 783 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pou2f2Q00196 463 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pls1Q3V0K9 630 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 LrmpQ60664 539 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tpd52Q62393 224 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 DlatQ8BMF4 642 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gprasp2Q8BUY8 826 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 MslnlQ8C160 685 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Plcg2Q8CIH5 1265 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Trib2Q8K4K3 343 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Krt84Q99M73 603 aa14.3□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Wfdc16A2A5H4 111 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms