RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 ShbQ6PD21 503 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Magea3Q6T340 320 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 NostrinQ6WKZ7 506 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 WhrnQ80VW5 918 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ppp1r15bQ8BFW3 697 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Smndc1Q8BGT7 238 aaKnown RBP9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Pnma2Q8BHK0 365 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Slc4a7Q8BTY2 1034 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Klhl25Q8R2P1 589 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Kiss1rQ91V45 396 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ssfa2Q922B9 1252 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 PgcQ9D7R7 392 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Vmn1r49Q9WUF1 310 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Eif2ak1Q9Z2R9 619 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Clip1Q922J3 1391 aa9.96□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Auts2A0A087WPF7 1261 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cd160O88875 185 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Mfsd14aP70187 490 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 NotoQ5TIS6 240 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Znf775Q8BI73 538 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Slc5a1Q8C3K6 665 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Kcnq3Q8K3F6 873 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Q91V76 315 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 AslQ91YI0 464 aa9.95□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Fyco1Q8VDC1 1437 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Pard3Q99NH2 1333 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Tespa1Q3U132 458 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ablim3Q69ZX8 682 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Taf1cQ6PDZ2 836 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 March6Q6ZQ89 909 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ostm1Q8BGT0 338 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gprc5cQ8K3J9 440 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 AasdhpptQ9CQF6 309 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Fbxw5Q9QXW2 573 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Rasgrp1Q9Z1S3 795 aa9.94□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Zscan18E9PUD6 809 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cyp2c39P56656 490 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 GstcdQ5RL51 634 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Grik1Q60934 836 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Insm1Q63ZV0 521 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Eaf1Q9D4C5 268 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gdf11Q9Z1W4 405 aa9.93□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Terf2O35144 541 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Clk2O35491 499 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Fzd1O70421 642 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Usp2O88623 613 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Adh1P00329 375 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 L1camP11627 1260 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Rap1gap2Q5SVL6 712 aaKnown RBP9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cyp2r1Q6VVW9 501 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Hsfy2Q80Y37 392 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cbx7Q8VDS3 158 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Kif2cQ922S8 721 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cdc37l1Q9CZP7 335 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Clcn2Q9R0A1 908 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Cul7Q8VE73 1689 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ankrd26Q811D2 1581 aa9.92□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 WrnO09053 1401 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ttll8A4Q9F1 832 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Fam129cD3YZB0 591 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gstp1P19157 210 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Mc3rP33033 323 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ttyh1Q9D3A9 450 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 LactbQ9EP89 551 aa9.91□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ms4a12A0A087WSB9 263 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gstp3F6RWR5 210 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 D1Pas1P16381 660 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gata3P23772 443 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Tbxa2rP30987 341 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Gbx1P82976 418 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Tmem151aQ6GQT5 468 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Mapre3Q6PER3 281 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ccdc57Q6PHN1 1016 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Tmem87aQ8BXN9 555 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ppfibp1Q8C8U0 969 aaKnown RBP9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Spink10Q8CAC8 162 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Tmco4Q91WU4 631 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Igf2bp3Q9CPN8 579 aaKnown RBP9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ssu72Q9CY97 194 aaKnown RBP9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Ceacam20Q9D2Z1 577 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Sh3bp5Q9Z131 463 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Kdm5bQ80Y84 1544 aa9.9□□□□□ -0.82
Ccdc54-201ENSMUST00000062439 Erich3F6QRE9 1637 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Plekha5E9Q6H8 1269 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Csrnp1P59054 583 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Nfatc3P97305 1075 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Ddx3yQ62095 658 aaKnown RBP9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Slitrk5Q810B7 957 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Olfr1352Q8VGX5 309 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Asb15Q8VHS6 583 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Adcy4Q91WF3 1077 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Fam84aQ9D650 292 aa9.89□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Nlgn4lB0F2B4 945 aa9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Pot1bH7BX60 640 aa9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Foxk1P42128 719 aaKnown RBP9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Ssrp1Q08943 708 aaKnown RBP9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Odr4Q4PJX1 447 aa9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Ddx17Q501J6 650 aaKnown RBP9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Mvb12bQ6KAU4 317 aa9.88□□□□□ -0.83
Ccdc54-201ENSMUST00000062439 Fchsd1Q6PFY1 688 aa9.88□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms