RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Madcam1Q61826 405 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Arhgap10Q6Y5D8 786 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Brd2Q7JJ13 798 aaKnown RBP11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Ncaph2Q8BSP2 607 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Cd2bp2Q9CWK3 342 aaKnown RBP11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Topaz1E5FYH1 1653 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 AU019823E9PUQ3 292 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 MsnP26041 577 aaKnown RBP11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Krt15Q61414 452 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Ddx19aQ61655 478 aaKnown RBP11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 BrapQ99MP8 591 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Tfcp2Q9ERA0 502 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 ShprhQ7TPQ3 1674 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Fbf1A2A870 1173 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Gm3414Q3TNU4 584 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Churc1Q6DG52 112 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Sptlc3Q8BG54 563 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Scfd1Q8BRF7 639 aaKnown RBP11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Cul7Q8VE73 1689 aa11.9□□□□□ -0.5
Limch1-201ENSMUST00000038188 Arrdc4A0A0B4J1F4 415 aa11.9□□□□□ -0.51
Limch1-201ENSMUST00000038188 Stat3P42227 770 aaKnown RBP11.9□□□□□ -0.51
Limch1-201ENSMUST00000038188 Slx4ipQ9D7Y9 413 aa11.9□□□□□ -0.51
Limch1-201ENSMUST00000038188 ItpripQ3TNL8 555 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Rbm46P86049 533 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Scnn1aQ61180 699 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Akap8Q9DBR0 687 aaKnown RBP11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Efcc1Q9JJF6 558 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ggps1Q9WTN0 300 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Atxn2lQ7TQH0 1049 aaKnown RBP11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Gle1Q8R322 699 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Anapc15-psA0A140T8L6 141 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 MtrA6H5Y3 1253 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Dact3Q0PHV7 610 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Dcaf17Q3TUL7 519 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Palb2Q3U0P1 1104 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ddx49Q4FZF3 480 aaKnown RBP11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Hoxa13Q62424 386 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Aldh8a1Q8BH00 487 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Gtf3c5Q8R2T8 520 aa11.89□□□□□ -0.51
Limch1-201ENSMUST00000038188 Znhit6Q3UFB2 460 aaKnown RBP11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ctnna3Q65CL1 895 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Rab11fip4Q8BQP8 635 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Hook3Q8BUK6 718 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ano2Q8CFW1 1002 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Rnf34Q99KR6 376 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Foxo4Q9WVH3 505 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Mns1Q61884 491 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Cwf19l2Q8BG79 887 aaKnown RBP11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Fbxo3Q9DC63 480 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Btnl4A2CG29 586 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 AK157302I3ITR1 129 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 DesP31001 469 aaKnown RBP11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Spout1Q3UHX9 385 aaKnown RBP11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Dppa3Q8QZY3 150 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Exoc1Q8R3S6 894 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Luzp1Q8R4U7 1068 aaKnown RBP11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Isca1Q9D924 129 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ppp1r3fQ9JIG4 799 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Map3k9Q3U1V8 1077 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ankfy1Q810B6 1169 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Fam135bQ9DAI6 1403 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Cyp4f39Q8BGU0 532 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 NcaphQ8C156 731 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Q8K2W9 541 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Q9D1F3 157 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 IcoslgQ9JHJ8 322 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Fem1bQ9Z2G0 627 aa11.88□□□□□ -0.51
Limch1-201ENSMUST00000038188 Fam47cQ14BE7 430 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 DbnlQ62418 436 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Scfd2Q8BTY8 684 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 AacsQ9D2R0 672 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Zfyve9A2A8R0 1397 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Apol10bG3X9K7 334 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ppil4Q9CXG3 492 aaKnown RBP11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Baiap2l1Q9DBJ3 514 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ltb4r2Q9JJL9 360 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Vwa3bJ9JI28 736 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Esr2O08537 530 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Snai1Q02085 264 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Krt40Q6IFX3 439 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 HomezQ80W88 542 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Bbs9Q811G0 885 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Kcnj14Q8JZN3 434 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Tp53i13Q5F267 385 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Actn1Q7TPR4 892 aaKnown RBP11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Zbtb9Q8CDC7 459 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Ubxn11Q9D572 484 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Mroh1E0CZ22 1640 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Jade2Q6ZQF7 829 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Slc7a6osQ7TPE5 306 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Tpcn2Q8BWC0 731 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Trex1Q91XB0 314 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Gnl2Q99LH1 728 aaKnown RBP11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Drc3Q9D5E4 523 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Stx6Q9JKK1 255 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Myl7Q9QVP4 175 aa11.87□□□□□ -0.51
Limch1-201ENSMUST00000038188 Tldc2A2ACG1 198 aa11.86□□□□□ -0.51
Limch1-201ENSMUST00000038188 Acnat1A2AKK5 416 aa11.86□□□□□ -0.51
Limch1-201ENSMUST00000038188 UrgcpQ5NCI0 926 aa11.86□□□□□ -0.51
Limch1-201ENSMUST00000038188 PigsQ6PD26 555 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms