RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Slc30a9Q5IRJ6 567 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ccdc125Q5U465 500 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cst12Q9DAN8 128 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Col4a3bpQ9EQG9 624 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cyth1Q9QX11 398 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Parp1P11103 1013 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ufl1Q8CCJ3 793 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Astn2Q80Z10 1352 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Snapc4Q8BP86 1333 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Mdm2P23804 489 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gas2l2Q5SSG4 860 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Krt12Q64291 487 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Slc7a6osQ7TPE5 306 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ccdc65Q8VHI7 493 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Xpo4Q9ESJ0 1151 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Actn4P57780 912 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 HomezQ80W88 542 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 NelfbQ8C4Y3 580 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Bmp2kQ91Z96 1138 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Frmpd1A2AKB4 1549 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Hcls1P49710 486 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cep104Q80V31 926 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tbx22Q8K402 517 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Angptl3Q9R182 455 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Zkscan16A2ALW2 728 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Zscan25B2RX31 543 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Apol11aE9PZG0 334 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cnot10Q8BH15 744 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cd2bp2Q9CWK3 342 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 BC005561E9Q5E2 1589 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Hmgb3O54879 200 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Anapc5Q8BTZ4 740 aa15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tnpo2Q99LG2 887 aaKnown RBP15.3■□□□□ 0.04
Col5a1-201ENSMUST00000028280 SpertQ32MG2 446 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ckap2lQ7TS74 745 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 TxlngQ8BHN1 524 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ppme1Q8BVQ5 386 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Myl7Q9QVP4 175 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 A0A1W2P7S8 802 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tbc1d2B1AVH7 922 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Casp8O89110 480 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cdc5lQ6A068 802 aaKnown RBP15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Sept8Q8CHH9 429 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Zfp597E9Q6S0 419 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Kcnk16G5E845 292 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pde11aP0C1Q2 933 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Dph5Q9CWQ0 281 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Faf1P54731 649 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Wdr36Q3TAQ9 899 aaKnown RBP15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pcdhb22Q91XZ8 794 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tsc1Q9EP53 1161 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gm4297D3YWB7 211 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pfdn6Q03958 127 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 IntuQ059U7 942 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Patl1Q3TC46 770 aaKnown RBP15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Dnajb7Q9QYI8 312 aa15.29■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pank2Q3U4S0 443 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gm14685Q52KH6 695 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ankrd13dQ6PD24 605 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ppp2r5bQ6PD28 497 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gnl3Q8CI11 538 aaKnown RBP15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 SdsQ8VBT2 327 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 ParnQ8VDG3 624 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ythdc2B2RR83 1445 aaKnown RBP15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Slc3a2P10852 526 aaKnown RBP15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Yipf3Q3UDR8 347 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 RragaQ80X95 313 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Lzts2Q91YU6 671 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 PdclQ9DBX2 301 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Kdm5cP41230 1554 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Tnip3A0A1D5RMN0 279 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Q8BZJ8 459 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 MgarpQ8VI64 283 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Grk2Q99MK8 689 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Hyou1Q9JKR6 999 aaKnown RBP15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Rtl9Q32KG4 1339 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Akap5D3YVF0 745 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 9230110C19RikQ8CC70 267 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Stk36Q69ZM6 1316 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Sdccag3A2AIW0 432 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 OtulinQ3UCV8 352 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ccdc92bQ5SUE3 299 aa15.28■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Gdap1O88741 358 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pla2g4fQ50L41 855 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pspc1Q8R326 523 aaKnown RBP15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Satb2Q8VI24 733 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Eef1gQ9D8N0 437 aaKnown RBP15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Abt1Q9QYL7 269 aaKnown RBP15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Cep85lA0A1W2P884 806 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 GsnP13020 780 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Hspa1lP16627 641 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Iqsec3Q3TES0 1195 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Skap1Q3UUV5 355 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Prune1Q8BIW1 454 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Strn3Q9ERG2 796 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Pik3caP42337 1068 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Spdl1Q923A2 608 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Lrp2bpQ9D4C6 346 aa15.27■□□□□ 0.04
Col5a1-201ENSMUST00000028280 Ppp2r5aQ6PD03 486 aa15.27■□□□□ 0.03
Col5a1-201ENSMUST00000028280 4932411N23RikQ8C0S0 470 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 104.1 ms