RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	ELP2	P42935	788 aa		4.87	□□□□□ -1.63
snR17b	snR17b	ASN2	P49090	572 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	SCY1	P53009	804 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RAI1	P53063	387 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	SOL4	P53315	255 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YGR266W	P53326	701 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RTT102	P53330	157 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YNR063W	P53749	607 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YNL033W	P53964	284 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YNL019C	P53975	284 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YNL010W	P53981	241 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	ERO1	Q03103	563 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RSC9	Q03124	581 aa		4.87	□□□□□ -1.63
snR17b	snR17b	ABZ2	Q03266	374 aa		4.87	□□□□□ -1.63
snR17b	snR17b	RCF1	Q03713	159 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YMR155W	Q03795	547 aa		4.87	□□□□□ -1.63
snR17b	snR17b	HSP31	Q04432	237 aa		4.87	□□□□□ -1.63
snR17b	snR17b	SVF1	Q05515	481 aa		4.87	□□□□□ -1.63
snR17b	snR17b	SSQ1	Q05931	657 aa	Predicted RBP	4.87	□□□□□ -1.63
snR17b	snR17b	SPH1	Q06160	661 aa		4.87	□□□□□ -1.63
snR17b	snR17b	DTD1	Q07648	150 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	YEH2	Q07950	538 aa		4.87	□□□□□ -1.63
snR17b	snR17b	PUS7	Q08647	676 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	MUM3	Q08750	479 aa		4.87	□□□□□ -1.63
snR17b	snR17b	THP3	Q12049	470 aa	Known RBP	4.87	□□□□□ -1.63
snR17b	snR17b	MED2	Q12124	431 aa		4.87	□□□□□ -1.63
snR17b	snR17b	YLL056C	Q12177	298 aa		4.87	□□□□□ -1.63
snR17b	snR17b	TUB2	P02557	457 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	TPK3	P05986	398 aa		4.86	□□□□□ -1.63
snR17b	snR17b	ERR1	P0CX10	437 aa		4.86	□□□□□ -1.63
snR17b	snR17b	ERR2	P0CX11	437 aa		4.86	□□□□□ -1.63
snR17b	snR17b	SEC2	P17065	759 aa		4.86	□□□□□ -1.63
snR17b	snR17b	SEC15	P22224	910 aa		4.86	□□□□□ -1.63
snR17b	snR17b	PAT1	P25644	796 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	CSM1	P25651	190 aa		4.86	□□□□□ -1.63
snR17b	snR17b	FRE1	P32791	686 aa		4.86	□□□□□ -1.63
snR17b	snR17b	SRB2	P34162	210 aa		4.86	□□□□□ -1.63
snR17b	snR17b	CLG1	P35190	452 aa		4.86	□□□□□ -1.63
snR17b	snR17b	SKG1	P36169	355 aa		4.86	□□□□□ -1.63
snR17b	snR17b	GRS1	P38088	690 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	ARN1	P38731	627 aa		4.86	□□□□□ -1.63
snR17b	snR17b	CRP1	P38845	465 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	EGD2	P38879	174 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	ERP2	P39704	215 aa		4.86	□□□□□ -1.63
snR17b	snR17b	YJR061W	P40355	935 aa		4.86	□□□□□ -1.63
snR17b	snR17b	ERR3	P42222	437 aa		4.86	□□□□□ -1.63
snR17b	snR17b	FAR7	P43592	221 aa		4.86	□□□□□ -1.63
snR17b	snR17b	YJL171C	P46992	396 aa		4.86	□□□□□ -1.63
snR17b	snR17b	BIR1	P47134	954 aa		4.86	□□□□□ -1.63
snR17b	snR17b	MSE1	P48525	536 aa		4.86	□□□□□ -1.63
snR17b	snR17b	ASN1	P49089	572 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	IMD3	P50095	523 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	SPC105	P53148	917 aa		4.86	□□□□□ -1.63
snR17b	snR17b	ARE2	P53629	642 aa	Known RBP	4.86	□□□□□ -1.63
snR17b	snR17b	COG5	P53951	403 aa		4.86	□□□□□ -1.63
snR17b	snR17b	YDR090C	Q03193	310 aa		4.86	□□□□□ -1.63
snR17b	snR17b	CSN9	Q03981	162 aa		4.86	□□□□□ -1.63
snR17b	snR17b	GAL83	Q04739	417 aa		4.86	□□□□□ -1.63
snR17b	snR17b	JIP5	Q06214	492 aa	Predicted RBP	4.86	□□□□□ -1.63
snR17b	snR17b	PSR1	Q07800	427 aa		4.86	□□□□□ -1.63
snR17b	snR17b	AIM39	Q08223	395 aa		4.86	□□□□□ -1.63
snR17b	snR17b	PMA1	P05030	918 aa	Known RBP	4.85	□□□□□ -1.63
snR17b	snR17b	TPK2	P06245	380 aa		4.85	□□□□□ -1.63
snR17b	snR17b	CDC31	P06704	161 aa	Known RBP	4.85	□□□□□ -1.63
snR17b	snR17b	PBS2	P08018	668 aa		4.85	□□□□□ -1.63
snR17b	snR17b	NFT1	P0CE68	1218 aa		4.85	□□□□□ -1.63
snR17b	snR17b	MCM1	P11746	286 aa		4.85	□□□□□ -1.63
snR17b	snR17b	PUT4	P15380	627 aa		4.85	□□□□□ -1.63
snR17b	snR17b	UGA1	P17649	471 aa		4.85	□□□□□ -1.63
snR17b	snR17b	CLN2	P20438	545 aa		4.85	□□□□□ -1.63
snR17b	snR17b	VPS33	P20795	691 aa		4.85	□□□□□ -1.63
snR17b	snR17b	CCA1	P21269	546 aa		4.85	□□□□□ -1.63
snR17b	snR17b	SSA4	P22202	642 aa	Known RBP	4.85	□□□□□ -1.63
snR17b	snR17b	KIN82	P25341	720 aa		4.85	□□□□□ -1.63
snR17b	snR17b	UBC8	P28263	218 aa		4.85	□□□□□ -1.63
snR17b	snR17b	HIR2	P32480	875 aa		4.85	□□□□□ -1.63
snR17b	snR17b	MRP4	P32902	394 aa		4.85	□□□□□ -1.63
snR17b	snR17b	RPC34	P32910	317 aa		4.85	□□□□□ -1.63
snR17b	snR17b	GDH2	P33327	1092 aa	Known RBP	4.85	□□□□□ -1.63
snR17b	snR17b	HCS1	P34243	683 aa		4.85	□□□□□ -1.63
snR17b	snR17b	PHO88	P38264	188 aa	Predicted RBP	4.85	□□□□□ -1.63
snR17b	snR17b	YBR242W	P38331	238 aa		4.85	□□□□□ -1.63
snR17b	snR17b	SWD1	P39706	426 aa		4.85	□□□□□ -1.63
snR17b	snR17b	PSF2	P40359	213 aa		4.85	□□□□□ -1.63
snR17b	snR17b	YJL070C	P40361	888 aa		4.85	□□□□□ -1.63
snR17b	snR17b	SER33	P40510	469 aa		4.85	□□□□□ -1.63
snR17b	snR17b	PRM2	P40534	656 aa		4.85	□□□□□ -1.63
snR17b	snR17b	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
snR17b	snR17b	ASG7	P46993	209 aa		4.85	□□□□□ -1.63
snR17b	snR17b	EFM3	P47163	339 aa		4.85	□□□□□ -1.63
snR17b	snR17b	ECL1	P48235	211 aa		4.85	□□□□□ -1.63
snR17b	snR17b	DIE2	P50076	525 aa		4.85	□□□□□ -1.63
snR17b	snR17b	AZR1	P50080	613 aa		4.85	□□□□□ -1.63
snR17b	snR17b	AIF1	P52923	378 aa		4.85	□□□□□ -1.63
snR17b	snR17b	YGL036W	P53185	909 aa	Predicted RBP	4.85	□□□□□ -1.63
snR17b	snR17b	BUD32	P53323	261 aa		4.85	□□□□□ -1.63
snR17b	snR17b	YPR003C	P53394	754 aa		4.85	□□□□□ -1.63
snR17b	snR17b	BNI4	P53858	892 aa		4.85	□□□□□ -1.63
snR17b	snR17b	VPS9	P54787	451 aa		4.85	□□□□□ -1.63
snR17b	snR17b	TLG1	Q03322	224 aa		4.85	□□□□□ -1.63

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