RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W COR1P07256 457 aa3.3□□□□□ -1.88
USE1YGL098W ERG11P10614 530 aa3.3□□□□□ -1.88
USE1YGL098W PEP5P12868 1029 aa3.3□□□□□ -1.88
USE1YGL098W PMT2P31382 759 aa3.3□□□□□ -1.88
USE1YGL098W VMA6P32366 345 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W RPT1P33299 467 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W PMT1P33775 817 aa3.3□□□□□ -1.88
USE1YGL098W TAF14P35189 244 aa3.3□□□□□ -1.88
USE1YGL098W SET3P36124 751 aa3.3□□□□□ -1.88
USE1YGL098W CCL1P37366 393 aa3.3□□□□□ -1.88
USE1YGL098W AHP1P38013 176 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W TSC10P38342 320 aa3.3□□□□□ -1.88
USE1YGL098W HXT5P38695 592 aa3.3□□□□□ -1.88
USE1YGL098W GRE3P38715 327 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
USE1YGL098W YHR078WP38799 552 aa3.3□□□□□ -1.88
USE1YGL098W CRG1P38892 291 aaRIP-Chip data3.3□□□□□ -1.88not detected
USE1YGL098W BFR1P38934 470 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88 RIP-Chip
USE1YGL098W MEF2P39677 819 aa3.3□□□□□ -1.88
USE1YGL098W SEN34P39707 275 aa3.3□□□□□ -1.88
USE1YGL098W BOL3P39724 118 aa3.3□□□□□ -1.88
USE1YGL098W YER034WP40022 185 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W PRK1P40494 810 aa3.3□□□□□ -1.88
USE1YGL098W MNT3P40549 630 aa3.3□□□□□ -1.88
USE1YGL098W COS4P43542 379 aa3.3□□□□□ -1.88
USE1YGL098W YJL181WP46987 611 aa3.3□□□□□ -1.88
USE1YGL098W LIA1P47120 325 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W RSM26P47141 266 aa3.3□□□□□ -1.88
USE1YGL098W COS5P47187 383 aa3.3□□□□□ -1.88
USE1YGL098W PIB2P53191 635 aa3.3□□□□□ -1.88
USE1YGL098W BUD9P53226 547 aa3.3□□□□□ -1.88
USE1YGL098W YNR063WP53749 607 aa3.3□□□□□ -1.88
USE1YGL098W COS1P53822 381 aa3.3□□□□□ -1.88
USE1YGL098W ASI2P53895 289 aa3.3□□□□□ -1.88
USE1YGL098W UBX4P54730 416 aa3.3□□□□□ -1.88
USE1YGL098W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
USE1YGL098W MTG1Q03151 367 aaPredicted RBP3.3□□□□□ -1.88
USE1YGL098W BNA7Q04066 261 aa3.3□□□□□ -1.88
USE1YGL098W TDA9Q04545 1251 aa3.3□□□□□ -1.88
USE1YGL098W COQ9Q05779 260 aa3.3□□□□□ -1.88
USE1YGL098W ATG38Q05789 226 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
USE1YGL098W MLH2Q07980 695 aa3.3□□□□□ -1.88
USE1YGL098W YPL191CQ08930 360 aa3.3□□□□□ -1.88
USE1YGL098W FEX2Q08991 375 aa3.3□□□□□ -1.88
USE1YGL098W THP3Q12049 470 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W WRS1Q12109 432 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W YOR214CQ12282 236 aa3.3□□□□□ -1.88
USE1YGL098W HRT3Q12347 344 aa3.3□□□□□ -1.88
USE1YGL098W TSC13Q99190 310 aa3.3□□□□□ -1.88
USE1YGL098W YOS9Q99220 542 aa3.3□□□□□ -1.88
USE1YGL098W UTP10P42945 1769 aaKnown RBP3.3□□□□□ -1.88
USE1YGL098W YLR462WO13556 202 aa3.29□□□□□ -1.88
USE1YGL098W CYT1P07143 309 aa3.29□□□□□ -1.88
USE1YGL098W CDC6P09119 513 aa3.29□□□□□ -1.88
USE1YGL098W RPS24AP0CX31 135 aaKnown RBP3.29□□□□□ -1.88
USE1YGL098W RPS24BP0CX32 135 aaKnown RBP3.29□□□□□ -1.88
USE1YGL098W CDC24P11433 854 aaPredicted RBP3.29□□□□□ -1.88
USE1YGL098W MRPL33P20084 86 aa3.29□□□□□ -1.88
USE1YGL098W VPS33P20795 691 aa3.29□□□□□ -1.88
USE1YGL098W MRPL8P22353 238 aa3.29□□□□□ -1.88
USE1YGL098W SGV1P23293 657 aaKnown RBP3.29□□□□□ -1.88
USE1YGL098W HXT2P23585 541 aa3.29□□□□□ -1.88
USE1YGL098W NPP1P25353 742 aa3.29□□□□□ -1.88
USE1YGL098W GFD2P25370 566 aaKnown RBP3.29□□□□□ -1.88
USE1YGL098W KRR1P25586 316 aaPredicted RBP3.29□□□□□ -1.88
USE1YGL098W AAD3P25612 363 aa3.29□□□□□ -1.88
USE1YGL098W CPR3P25719 182 aa3.29□□□□□ -1.88
USE1YGL098W XRS2P33301 854 aa3.29□□□□□ -1.88
USE1YGL098W PEX6P33760 1030 aa3.29□□□□□ -1.88
USE1YGL098W TYS1P36421 394 aaKnown RBP3.29□□□□□ -1.88
USE1YGL098W YBR139WP38109 508 aa3.29□□□□□ -1.88
USE1YGL098W ECM31P38122 312 aa3.29□□□□□ -1.88
USE1YGL098W KTR3P38130 404 aaPredicted RBP3.29□□□□□ -1.88
USE1YGL098W TDP1P38319 544 aa3.29□□□□□ -1.88
USE1YGL098W MMS21P38632 267 aa3.29□□□□□ -1.88
USE1YGL098W YHL049CP38722 271 aa3.29□□□□□ -1.88
USE1YGL098W IPL1P38991 367 aa3.29□□□□□ -1.88
USE1YGL098W AKR1P39010 764 aa3.29□□□□□ -1.88
USE1YGL098W SEO1P39709 593 aa3.29□□□□□ -1.88
USE1YGL098W OAF1P39720 1047 aaPredicted RBP3.29□□□□□ -1.88
USE1YGL098W AIM2P39721 246 aa3.29□□□□□ -1.88
USE1YGL098W SSO2P39926 295 aa3.29□□□□□ -1.88
USE1YGL098W UBP5P39944 805 aa3.29□□□□□ -1.88
USE1YGL098W YEL075CP39972 122 aa3.29□□□□□ -1.88
USE1YGL098W YER189WP40104 122 aa3.29□□□□□ -1.88
USE1YGL098W PSY2P40164 858 aa3.29□□□□□ -1.88
USE1YGL098W YIL077CP40508 320 aa3.29□□□□□ -1.88
USE1YGL098W YFL064CP43540 174 aa3.29□□□□□ -1.88
USE1YGL098W FET5P43561 622 aa3.29□□□□□ -1.88
USE1YGL098W RAD17P48581 401 aa3.29□□□□□ -1.88
USE1YGL098W GPI8P49018 411 aa3.29□□□□□ -1.88
USE1YGL098W LYS4P49367 693 aaPredicted RBP3.29□□□□□ -1.88
USE1YGL098W RIM8P53179 542 aa3.29□□□□□ -1.88
USE1YGL098W DAM1P53267 343 aa3.29□□□□□ -1.88
USE1YGL098W COG2P53271 262 aa3.29□□□□□ -1.88
USE1YGL098W YGR125WP53273 1036 aa3.29□□□□□ -1.88
USE1YGL098W DBP6P53734 629 aaKnown RBP3.29□□□□□ -1.88
USE1YGL098W MPS1P54199 764 aa3.29□□□□□ -1.88
USE1YGL098W PET117Q02771 107 aa3.29□□□□□ -1.88
USE1YGL098W DIG1Q03063 452 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms