RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 DNAJC18Q9H819 358 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 ATP11BQ9Y2G3 1177 aa18.41■□□□□ 0.54
SRRM4-204ENST00000641899 DOCK3Q8IZD9 2030 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
SRRM4-204ENST00000641899 STRNO43815 780 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 USP5P45974 858 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 GRB14Q14449 540 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 RAB3GAP1Q15042 981 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 ZYXQ15942 572 aaKnown RBP18.4■□□□□ 0.54
SRRM4-204ENST00000641899 LBX2Q6XYB7 198 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 CATSPERGQ6ZRH7 1159 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 TTC6Q86TZ1 520 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 KIAA1683Q9H0B3 1180 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
SRRM4-204ENST00000641899 SAP30BPQ9UHR5 308 aaKnown RBP18.4■□□□□ 0.54
SRRM4-204ENST00000641899 SERPINB13Q9UIV8 391 aa18.4■□□□□ 0.54
SRRM4-204ENST00000641899 SMAD3P84022 425 aaKnown RBP18.39■□□□□ 0.53
SRRM4-204ENST00000641899 OS9Q13438 667 aaPredicted RBP18.39■□□□□ 0.53
SRRM4-204ENST00000641899 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.53
SRRM4-204ENST00000641899 CDX2Q99626 313 aaPredicted RBP18.39■□□□□ 0.53
SRRM4-204ENST00000641899 GPR108Q9NPR9 543 aa18.39■□□□□ 0.53
SRRM4-204ENST00000641899 JAG1P78504 1218 aa18.38■□□□□ 0.53
SRRM4-204ENST00000641899 CERKLQ49MI3 558 aaPredicted RBP18.38■□□□□ 0.53
SRRM4-204ENST00000641899 EHD4Q9H223 541 aa18.38■□□□□ 0.53
SRRM4-204ENST00000641899 SEMA6BQ9H3T3 888 aa18.38■□□□□ 0.53
SRRM4-204ENST00000641899 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
SRRM4-204ENST00000641899 HOXC10Q9NYD6 342 aa18.38■□□□□ 0.53
SRRM4-204ENST00000641899 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
SRRM4-204ENST00000641899 VCAM1P19320 739 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 CYP7A1P22680 504 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 CYP2C19P33261 490 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 ABCB5Q2M3G0 1257 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 OLFML2BQ68BL8 750 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 TATDN1Q6P1N9 297 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 SLC39A5Q6ZMH5 540 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 ZNF512BQ96KM6 892 aaPredicted RBP18.37■□□□□ 0.53
SRRM4-204ENST00000641899 FLRT1Q9NZU1 646 aa18.37■□□□□ 0.53
SRRM4-204ENST00000641899 TMEM265A0A087WTH1 108 aa18.36■□□□□ 0.53
SRRM4-204ENST00000641899 CNMDO75829 334 aa18.36■□□□□ 0.53
SRRM4-204ENST00000641899 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
SRRM4-204ENST00000641899 FOSL2P15408 326 aa18.36■□□□□ 0.53
SRRM4-204ENST00000641899 SHHQ15465 462 aa18.36■□□□□ 0.53
SRRM4-204ENST00000641899 GJC2Q5T442 439 aaPredicted RBP18.36■□□□□ 0.53
SRRM4-204ENST00000641899 PLXNB2O15031 1838 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 SEPT4O43236 478 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
SRRM4-204ENST00000641899 CYBAP13498 195 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 COG2Q14746 738 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 TNNI3KQ59H18 835 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 MB21D1Q8N884 522 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 CDCA7LQ96GN5 454 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 RPAP3Q9H6T3 665 aaPredicted RBP18.35■□□□□ 0.53
SRRM4-204ENST00000641899 PRDM6Q9NQX0 595 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 FPGT-TNNI3KV9GXZ4 949 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 UNC80Q8N2C7 3258 aa18.35■□□□□ 0.53
SRRM4-204ENST00000641899 ZNF316A6NFI3 1004 aaPredicted RBP18.34■□□□□ 0.53
SRRM4-204ENST00000641899 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
SRRM4-204ENST00000641899 ADORA2AP29274 412 aa18.34■□□□□ 0.53
SRRM4-204ENST00000641899 SHROOM1Q2M3G4 852 aaPredicted RBP18.34■□□□□ 0.53
SRRM4-204ENST00000641899 TRMT2AQ8IZ69 625 aaKnown RBP18.34■□□□□ 0.53
SRRM4-204ENST00000641899 SHCBP1Q8NEM2 672 aa18.34■□□□□ 0.53
SRRM4-204ENST00000641899 NPLOC4Q8TAT6 608 aa18.34■□□□□ 0.53
SRRM4-204ENST00000641899 BADQ92934 168 aa18.34■□□□□ 0.53
SRRM4-204ENST00000641899 TACC3Q9Y6A5 838 aa18.34■□□□□ 0.53
SRRM4-204ENST00000641899 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
SRRM4-204ENST00000641899 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.52
SRRM4-204ENST00000641899 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
SRRM4-204ENST00000641899 C1orf53Q5VUE5 145 aa18.33■□□□□ 0.52
SRRM4-204ENST00000641899 POTEEQ6S8J3 1075 aa18.33■□□□□ 0.52
SRRM4-204ENST00000641899 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
SRRM4-204ENST00000641899 MROH8Q9H579 483 aa18.33■□□□□ 0.52
SRRM4-204ENST00000641899 BTBD7Q9P203 1132 aa18.33■□□□□ 0.52
SRRM4-204ENST00000641899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.33■□□□□ 0.52
SRRM4-204ENST00000641899 ZAP70P43403 619 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 SNX17Q15036 470 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 TRIM60Q495X7 471 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 ABRAQ8N0Z2 381 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 TANGO6Q9C0B7 1094 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 SPATC1LQ9H0A9 340 aa18.32■□□□□ 0.52
SRRM4-204ENST00000641899 PNMA6EA0A0J9YXQ4 647 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 POLR3DP05423 398 aaPredicted RBP18.31■□□□□ 0.52
SRRM4-204ENST00000641899 ADCYAP1R1P41586 468 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
SRRM4-204ENST00000641899 C9orf50Q5SZB4 431 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 RNF180Q86T96 592 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 MYLIPQ8WY64 445 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 RNPC3Q96LT9 517 aaKnown RBP18.31■□□□□ 0.52
SRRM4-204ENST00000641899 SH2D4AQ9H788 454 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 NRBP1Q9UHY1 535 aa18.31■□□□□ 0.52
SRRM4-204ENST00000641899 RARBP10826 455 aa18.3■□□□□ 0.52
SRRM4-204ENST00000641899 TRPV1Q8NER1 839 aa18.3■□□□□ 0.52
SRRM4-204ENST00000641899 ACER1Q8TDN7 264 aa18.3■□□□□ 0.52
SRRM4-204ENST00000641899 MOV10L1Q9BXT6 1211 aaKnown RBP18.3■□□□□ 0.52
SRRM4-204ENST00000641899 PDLIM7Q9NR12 457 aa18.3■□□□□ 0.52
SRRM4-204ENST00000641899 MPHOSPH10O00566 681 aaKnown RBP18.29■□□□□ 0.52
SRRM4-204ENST00000641899 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
SRRM4-204ENST00000641899 FCER1AP12319 257 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms