RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SEC23AQ15436 765 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 KIF4BQ2VIQ3 1234 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 FAM47AQ5JRC9 791 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 APOA5Q6Q788 366 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 TTC6Q86TZ1 520 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 IQCA1Q86XH1 822 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 TMTC2Q8N394 836 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 NSUN7Q8NE18 718 aaKnown RBP15.33■□□□□ 0.04
PHGDH-221ENST00000641573 AGBL3Q8NEM8 1001 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 SMARCC2Q8TAQ2 1214 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 ZNF296Q8WUU4 475 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-221ENST00000641573 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-221ENST00000641573 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 ZNF287Q9HBT7 754 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 SLC12A7Q9Y666 1083 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 TNKSO95271 1327 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 FOCADQ5VW36 1801 aa15.33■□□□□ 0.04
PHGDH-221ENST00000641573 TSPY2A6NKD2 308 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 DHX16O60231 1041 aaKnown RBP15.32■□□□□ 0.04
PHGDH-221ENST00000641573 EGFRP00533 1210 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 SYT1P21579 422 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 CDK8P49336 464 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.041e-10■■■□□ 15.8
PHGDH-221ENST00000641573 NFIAQ12857 509 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 NBR1Q14596 966 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 FBXO46Q6PJ61 603 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-221ENST00000641573 SYNE3Q6ZMZ3 975 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 SLC44A5Q8NCS7 719 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 CDCA5Q96FF9 252 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
PHGDH-221ENST00000641573 IDI2Q9BXS1 227 aa15.32■□□□□ 0.04
PHGDH-221ENST00000641573 PTPDC1A2A3K4 754 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 STX6O43752 255 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 CACNB3P54284 484 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 FKBP1BP68106 108 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 HMGN5P82970 282 aaKnown RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 TFAP4Q01664 338 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 FOXD4L5Q5VV16 416 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 LARP1BQ659C4 914 aaKnown RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 OGFOD1Q8N543 542 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 ENAHQ8N8S7 591 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 FOXD4L4Q8WXT5 416 aaPredicted RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 GBP4Q96PP9 640 aa15.31■□□□□ 0.04
PHGDH-221ENST00000641573 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
PHGDH-221ENST00000641573 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
PHGDH-221ENST00000641573 TBC1D8O95759 1140 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 HLA-DOAP06340 250 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 MYH1P12882 1939 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 RXRAP19793 462 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 RASA1P20936 1047 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 PDCP20941 246 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 DLGAP5Q15398 846 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
PHGDH-221ENST00000641573 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 ZFPM1Q8IX07 1006 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 MYL10Q9BUA6 226 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 FAM198AQ9UFP1 575 aa15.3■□□□□ 0.04
PHGDH-221ENST00000641573 POLR2AP24928 1970 aaKnown RBP15.29■□□□□ 0.04
PHGDH-221ENST00000641573 ECM29Q5VYK3 1845 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 NID2Q14112 1375 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 CPLX1O14810 134 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 NMT2O60551 498 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 TSPY3P0CV98 308 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 TSPY8P0CW00 308 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 ZSCAN22P10073 491 aaPredicted RBP15.29■□□□□ 0.04
PHGDH-221ENST00000641573 PDIA4P13667 645 aaKnown RBP15.29■□□□□ 0.04
PHGDH-221ENST00000641573 MCM4P33991 863 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 RCAN1P53805 252 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 GABPAQ06546 454 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 CCDC178Q5BJE1 867 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 CLEC17AQ6ZS10 378 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 FAM184AQ8NB25 1140 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 MTMR6Q9Y217 621 aa15.29■□□□□ 0.04
PHGDH-221ENST00000641573 GPR25O00155 361 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 ENTPD3O75355 529 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 BAG4O95429 457 aaKnown RBP15.28■□□□□ 0.04
PHGDH-221ENST00000641573 CDC27P30260 824 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 ADD1P35611 737 aaKnown RBP15.28■□□□□ 0.04
PHGDH-221ENST00000641573 TCP10Q12799 353 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 RTN1Q16799 776 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
PHGDH-221ENST00000641573 CATIPQ7Z7H3 387 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 MTMR14Q8NCE2 650 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 NUP133Q8WUM0 1156 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
PHGDH-221ENST00000641573 IL17RBQ9NRM6 502 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 FAM217BQ9NTX9 383 aaPredicted RBP15.28■□□□□ 0.04
PHGDH-221ENST00000641573 TCP11L1Q9NUJ3 509 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
PHGDH-221ENST00000641573 SWAP70Q9UH65 585 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms