RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 FAM47AQ5JRC9 791 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 KRT40Q6A162 431 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 GALNT17Q6IS24 598 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 NBPF11Q86T75 865 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 METTL16Q86W50 562 aaKnown RBP11.25□□□□□ -0.61
PHGDH-215ENST00000641371 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-215ENST00000641371 LEO1Q8WVC0 666 aaPredicted RBP11.25□□□□□ -0.61
PHGDH-215ENST00000641371 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 POLR3EQ9NVU0 708 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
PHGDH-215ENST00000641371 RCOR1Q9UKL0 485 aa11.25□□□□□ -0.61
PHGDH-215ENST00000641371 GOLGA6L3A6NEY3 463 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 BMP15O95972 392 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 RXRAP19793 462 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 U2AF2P26368 475 aaKnown RBP eCLIP11.24□□□□□ -0.614e-10■■□□□ 11.5
PHGDH-215ENST00000641371 CALML3P27482 149 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-215ENST00000641371 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 CCDC183Q5T5S1 534 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 RCSD1Q6JBY9 416 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 CCDC12Q8WUD4 166 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-215ENST00000641371 DYNLL2Q96FJ2 89 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 GMLQ99445 158 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 MYL10Q9BUA6 226 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 ZNF277Q9NRM2 450 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-215ENST00000641371 DDX19AQ9NUU7 478 aaKnown RBP11.24□□□□□ -0.61
PHGDH-215ENST00000641371 RTEL1Q9NZ71 1219 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 CEP131Q9UPN4 1083 aa11.24□□□□□ -0.61
PHGDH-215ENST00000641371 MORC2Q9Y6X9 1032 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-215ENST00000641371 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-215ENST00000641371 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 PSMD14O00487 310 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 TTLL1O95922 423 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 MMP1P03956 469 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 TNNI2P48788 182 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 FUT2Q10981 343 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 RILPL1Q5EBL4 403 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 MYSM1Q5VVJ2 828 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 CAVIN1Q6NZI2 390 aaKnown RBP11.23□□□□□ -0.61
PHGDH-215ENST00000641371 FAM83AQ86UY5 434 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 CCDC144CPQ8IYA2 1237 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 PHKBQ93100 1093 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 SPZ1Q9BXG8 430 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 SPON1Q9HCB6 807 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
PHGDH-215ENST00000641371 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 CNTNAP5Q8WYK1 1306 aa11.23□□□□□ -0.61
PHGDH-215ENST00000641371 IGKV6D-41A0A0C4DH26 115 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 PARP1P09874 1014 aaKnown RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 SCG2P13521 617 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 NASPP49321 788 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 MRE11P49959 708 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 EIF6P56537 245 aaKnown RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 TNFAIP1Q13829 316 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 FOXD4L6Q3SYB3 417 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 GPATCH4Q5T3I0 446 aaKnown RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 FOXD4L3Q6VB84 417 aaPredicted RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 TMEM179Q6ZVK1 233 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 RAB11FIP4Q86YS3 637 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 ADAMTSL1Q8N6G6 1762 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 DPF2Q92785 391 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 TMEM47Q9BQJ4 181 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 MXD3Q9BW11 206 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 KANSL2Q9H9L4 492 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 GINM1Q9NU53 330 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 MTMR4Q9NYA4 1195 aa11.22□□□□□ -0.61
PHGDH-215ENST00000641371 NOL7Q9UMY1 257 aaKnown RBP11.22□□□□□ -0.61
PHGDH-215ENST00000641371 A0A1W2PQ27 194 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 A0A1W2PQ64 194 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 A0A1W2PQD8 194 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 FSD2A1L4K1 749 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 PALM3A6NDB9 673 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-215ENST00000641371 CTAGE5O15320 804 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 PPP6R2O75170 966 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 RAD17O75943 681 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
PHGDH-215ENST00000641371 KRT2P35908 639 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 PTGER2P43116 358 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 STK38Q15208 465 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
PHGDH-215ENST00000641371 ZSCAN23Q3MJ62 389 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 TATDN1Q6P1N9 297 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 NOSTRINQ8IVI9 506 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 TEX2Q8IWB9 1127 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 ZSCAN29Q8IWY8 852 aaPredicted RBP11.21□□□□□ -0.61
PHGDH-215ENST00000641371 SLC44A5Q8NCS7 719 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms