RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 MIGA2Q7L4E1 593 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 NSUN7Q8NE18 718 aaKnown RBP20.55■□□□□ 0.88
PHGDH-214ENST00000641314 ANKS1AQ92625 1134 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 DDX11Q96FC9 970 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 PTPDC1A2A3K4 754 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 PPFIA3O75145 1194 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 DDAH1O94760 285 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 CDC27P30260 824 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 CLEC10AQ8IUN9 316 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 TMEM47Q9BQJ4 181 aa20.55■□□□□ 0.88
PHGDH-214ENST00000641314 NID2Q14112 1375 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 IGKV6D-41A0A0C4DH26 115 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 CALM1P0DP23 149 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 CALM2P0DP24 149 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 CALM3P0DP25 149 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 ADD1P35611 737 aaKnown RBP20.54■□□□□ 0.88
PHGDH-214ENST00000641314 RCAN1P53805 252 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 ABCB5Q2M3G0 1257 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-214ENST00000641314 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 TEPSINQ96N21 525 aa20.54■□□□□ 0.88
PHGDH-214ENST00000641314 GREB1LQ9C091 1923 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-214ENST00000641314 TBC1D12O60347 775 aa20.53■□□□□ 0.88
PHGDH-214ENST00000641314 FANCBQ8NB91 859 aa20.53■□□□□ 0.88
PHGDH-214ENST00000641314 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
PHGDH-214ENST00000641314 FAM217BQ9NTX9 383 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-214ENST00000641314 MTMR4Q9NYA4 1195 aa20.53■□□□□ 0.88
PHGDH-214ENST00000641314 MTMR7Q9Y216 660 aa20.53■□□□□ 0.88
PHGDH-214ENST00000641314 ATP2B2Q01814 1243 aa20.52■□□□□ 0.88
PHGDH-214ENST00000641314 TROAPQ12815 778 aa20.52■□□□□ 0.88
PHGDH-214ENST00000641314 PKP1Q13835 747 aa20.52■□□□□ 0.88
PHGDH-214ENST00000641314 RRP1BQ14684 758 aaKnown RBP20.52■□□□□ 0.88
PHGDH-214ENST00000641314 CPLX2Q6PUV4 134 aaKnown RBP20.52■□□□□ 0.88
PHGDH-214ENST00000641314 CDKL5O76039 1030 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 TOP1P11387 765 aaKnown RBP20.51■□□□□ 0.87
PHGDH-214ENST00000641314 EPHX2P34913 555 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
PHGDH-214ENST00000641314 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 CABP5Q9NP86 173 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 CLIP2Q9UDT6 1046 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 CCDC196A0A1B0GTZ2 297 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 TTLL1O95922 423 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 GH2P01242 217 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 NOVP48745 357 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 NUCB2P80303 420 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 SEPT2Q15019 361 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 NBPF12Q5TAG4 269 aaPredicted RBP20.51■□□□□ 0.87
PHGDH-214ENST00000641314 PRAMEF18Q5VWM3 479 aa20.51■□□□□ 0.87
PHGDH-214ENST00000641314 LRRC47Q8N1G4 583 aaKnown RBP20.51■□□□□ 0.87
PHGDH-214ENST00000641314 CTCFLQ8NI51 663 aaPredicted RBP20.51■□□□□ 0.87
PHGDH-214ENST00000641314 DCPSQ96C86 337 aaKnown RBP20.51■□□□□ 0.87
PHGDH-214ENST00000641314 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
PHGDH-214ENST00000641314 JAG1P78504 1218 aa20.5■□□□□ 0.87
PHGDH-214ENST00000641314 RAB3GAP1Q15042 981 aa20.5■□□□□ 0.87
PHGDH-214ENST00000641314 PPP4R3BQ5MIZ7 849 aa20.5■□□□□ 0.87
PHGDH-214ENST00000641314 USP50Q70EL3 339 aaPredicted RBP20.5■□□□□ 0.87
PHGDH-214ENST00000641314 SCN4AP35499 1836 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 IQCA1LA6NCM1 817 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 SYT1P21579 422 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 GUCY1A2P33402 732 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 FOSBP53539 338 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 ICA1Q05084 483 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-214ENST00000641314 LARP1BQ659C4 914 aaKnown RBP20.49■□□□□ 0.87
PHGDH-214ENST00000641314 CMTR1Q8N1G2 835 aaKnown RBP20.49■□□□□ 0.87
PHGDH-214ENST00000641314 CCDC82Q8N4S0 544 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-214ENST00000641314 PHKBQ93100 1093 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 KANSL2Q9H9L4 492 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 RBM28Q9NW13 759 aaKnown RBP20.49■□□□□ 0.87
PHGDH-214ENST00000641314 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 PPP2R3BQ9Y5P8 575 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
PHGDH-214ENST00000641314 POLR2AP24928 1970 aaKnown RBP20.49■□□□□ 0.87
PHGDH-214ENST00000641314 MAP3K10Q02779 954 aa20.48■□□□□ 0.87
PHGDH-214ENST00000641314 PPP2R5BQ15173 497 aa20.48■□□□□ 0.87
PHGDH-214ENST00000641314 NTRK3Q16288 839 aa20.48■□□□□ 0.87
PHGDH-214ENST00000641314 EAPPQ56P03 285 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-214ENST00000641314 SLC26A6Q9BXS9 759 aa20.48■□□□□ 0.87
PHGDH-214ENST00000641314 TAF1DQ9H5J8 278 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-214ENST00000641314 ORC3Q9UBD5 711 aaPredicted RBP20.48■□□□□ 0.87
PHGDH-214ENST00000641314 WDR90Q96KV7 1748 aa20.48■□□□□ 0.87
PHGDH-214ENST00000641314 STX6O43752 255 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 PLEKHA8P1O95397 391 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 EEF2P13639 858 aaKnown RBP20.47■□□□□ 0.87
PHGDH-214ENST00000641314 PDCP20941 246 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 KIF5BP33176 963 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 GRM4Q14833 912 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 DCAF15Q66K64 600 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 SULF1Q8IWU6 871 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 ZBTB21Q9ULJ3 1066 aa20.47■□□□□ 0.87
PHGDH-214ENST00000641314 VPS37CA5D8V6 355 aaPredicted RBP20.46■□□□□ 0.87
PHGDH-214ENST00000641314 ADM5C9JUS6 153 aa20.46■□□□□ 0.87
PHGDH-214ENST00000641314 FDPSP14324 419 aaKnown RBP20.46■□□□□ 0.87
PHGDH-214ENST00000641314 IFNAR1P17181 557 aa20.46■□□□□ 0.87
PHGDH-214ENST00000641314 CAP2P40123 477 aa20.46■□□□□ 0.87
PHGDH-214ENST00000641314 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
PHGDH-214ENST00000641314 RASGRP2Q7LDG7 609 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms