RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 FAM126AQ9BYI3 521 aaPredicted RBP9.07□□□□□ -0.96
SCARB2-224ENST00000640880 GMPR2Q9P2T1 348 aaKnown RBP9.07□□□□□ -0.96
SCARB2-224ENST00000640880 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
SCARB2-224ENST00000640880 ATP8A1Q9Y2Q0 1164 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 SUGT1Q9Y2Z0 365 aa9.07□□□□□ -0.96
SCARB2-224ENST00000640880 UGGT2Q9NYU1 1516 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 KIAA0556O60303 1618 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 SNRPBP14678 240 aaKnown RBP9.06□□□□□ -0.96
SCARB2-224ENST00000640880 L1CAMP32004 1257 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 STAT3P40763 770 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 MAP2K3P46734 347 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 SV2CQ496J9 727 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 FOXB2Q5VYV0 432 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 KLHDC7BQ96G42 594 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 SGSM3Q96HU1 749 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 FAM86C1Q9NVL1 165 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 STARD13Q9Y3M8 1113 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 ARAP1Q96P48 1450 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 ERCC6L2Q5T890 1561 aa9.06□□□□□ -0.96
SCARB2-224ENST00000640880 CCDC163A0A0D9SF12 145 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 NLRP12P59046 1061 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 ZC3H12AQ5D1E8 599 aaKnown RBP9.05□□□□□ -0.96
SCARB2-224ENST00000640880 CT47A1Q5JQC4 288 aaPredicted RBP9.05□□□□□ -0.96
SCARB2-224ENST00000640880 CYB5RLQ6IPT4 315 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 WFDC8Q8IUA0 241 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 EXOC2Q96KP1 924 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 CDC6Q99741 560 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 WNT10AQ9GZT5 417 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 PICK1Q9NRD5 415 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 HIF3AQ9Y2N7 669 aa9.05□□□□□ -0.96
SCARB2-224ENST00000640880 A0A087X0B3 334 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 KCNQ2O43526 872 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 RFPL3O75679 317 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 ALBP02768 609 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 AFF1P51825 1210 aaKnown RBP9.04□□□□□ -0.96
SCARB2-224ENST00000640880 BBS9Q3SYG4 887 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 PPM1JQ5JR12 505 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 HP1BP3Q5SSJ5 553 aaPredicted RBP9.04□□□□□ -0.96
SCARB2-224ENST00000640880 ZNF787Q6DD87 383 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 C20orf204Q6ZNR8 217 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 PHACTR4Q8IZ21 702 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 WDR18Q9BV38 432 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 CAAP1Q9H8G2 361 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 NCOA5Q9HCD5 579 aaKnown RBP9.04□□□□□ -0.96
SCARB2-224ENST00000640880 FAN1Q9Y2M0 1017 aa9.04□□□□□ -0.96
SCARB2-224ENST00000640880 LOC100289279A0A1B0GTE1 492 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 PDE8AO60658 829 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 RAPGEF3O95398 923 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 NAT2P11245 290 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 POU3F3P20264 500 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-224ENST00000640880 SOX5P35711 763 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 YARSP54577 528 aaKnown RBP9.03□□□□□ -0.96
SCARB2-224ENST00000640880 SUZ12Q15022 739 aaKnown RBP9.03□□□□□ -0.96
SCARB2-224ENST00000640880 FAM209AQ5JX71 171 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 FMNL3Q8IVF7 1028 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 KLHL23Q8NBE8 558 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 KISS1RQ969F8 398 aaPredicted RBP9.03□□□□□ -0.96
SCARB2-224ENST00000640880 DHRS1Q96LJ7 313 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 SLC6A18Q96N87 628 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 ARHGEF4Q9NR80 690 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 MBIPQ9NS73 344 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 TJP2Q9UDY2 1190 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 PCDHGC5Q9Y5F6 944 aa9.03□□□□□ -0.96
SCARB2-224ENST00000640880 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 EFCAB5A4FU69 1503 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 A0A1W2PQU0 124 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 PLD2O14939 933 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 LILRB5O75023 590 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 AOC2O75106 756 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 TP53P04637 393 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 CCNFP41002 786 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 ZNF143P52747 638 aaPredicted RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 PMS1P54277 932 aaKnown RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 RING1Q06587 406 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 TDRD10Q5VZ19 366 aaKnown RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 PPFIBP1Q86W92 1011 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 DDX42Q86XP3 938 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 MCATQ8IVS2 390 aaKnown RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 UBR7Q8N806 425 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 TMEM87BQ96K49 555 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 IPO9Q96P70 1041 aaKnown RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 KIF2CQ99661 725 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 DHRS4Q9BTZ2 278 aa9.02□□□□□ -0.97
SCARB2-224ENST00000640880 MRPS23Q9Y3D9 190 aaKnown RBP9.02□□□□□ -0.97
SCARB2-224ENST00000640880 TRAV20A0A0B4J274 112 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 ANKRD34BA5PLL1 514 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 PTPRGP23470 1445 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 NFKB2Q00653 900 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 BRDTQ58F21 947 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-224ENST00000640880 SAMD9Q5K651 1589 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 ZBTB37Q5TC79 503 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 YOD1Q5VVQ6 348 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-224ENST00000640880 SLCO4C1Q6ZQN7 724 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 TMEM192Q8IY95 271 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 GOLGA6L1Q8N7Z2 621 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 RAD18Q9NS91 495 aa9.01□□□□□ -0.97
SCARB2-224ENST00000640880 SLC52A1Q9NWF4 448 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms