RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 PRDX5P30044 214 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 IARSP41252 1262 aaKnown RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 ZGPATQ8N5A5 531 aaKnown RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MAGEB6Q8N7X4 407 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 TBC1D22AQ8WUA7 517 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 APPBP2Q92624 585 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 OSBP2Q969R2 916 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 RBCK1Q9BYM8 510 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 OSBPL2Q9H1P3 480 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 HELLSQ9NRZ9 838 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 DNAAF2Q9NVR5 837 aaKnown RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 RAI14Q9P0K7 980 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 ZNF646O15015 1829 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MAST3O60307 1309 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 ZNF532Q9HCE3 1301 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MAST2Q6P0Q8 1798 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 ZNF76P36508 570 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 FMR1Q06787 632 aaKnown RBP eCLIP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MTMR3Q13615 1198 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 GRIK5Q16478 980 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MCMDC2Q4G0Z9 681 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MFSD14BQ5SR56 506 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 SPTY2D1Q68D10 685 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 TTLL5Q6EMB2 1281 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 ZNF589Q86UQ0 364 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 PHTF2Q8N3S3 785 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 MORC4Q8TE76 937 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 ZNF384Q8TF68 577 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 SEC62Q99442 399 aaKnown RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 KCNQ5Q9NR82 932 aa9.5□□□□□ -0.89
SCARB2-220ENST00000640076 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.5□□□□□ -0.89
SCARB2-220ENST00000640076 PSME4Q14997 1843 aa9.49□□□□□ -0.89
SCARB2-220ENST00000640076 YDJCA8MPS7 323 aa9.49□□□□□ -0.89
SCARB2-220ENST00000640076 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
SCARB2-220ENST00000640076 LDHBP07195 334 aaKnown RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 MCCD1P59942 119 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 RBM10P98175 930 aaKnown RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 MECOMQ03112 1051 aa9.49□□□□□ -0.89
SCARB2-220ENST00000640076 RNF187Q5TA31 235 aaPredicted RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 STRIP1Q5VSL9 837 aa9.49□□□□□ -0.89
SCARB2-220ENST00000640076 NSUN4Q96CB9 384 aaKnown RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 UPF2Q9HAU5 1272 aaKnown RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 DMGDHQ9UI17 866 aaKnown RBP9.49□□□□□ -0.89
SCARB2-220ENST00000640076 FAN1Q9Y2M0 1017 aa9.49□□□□□ -0.89
SCARB2-220ENST00000640076 M0R2C6 588 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 TREHO43280 583 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 SORBS3O60504 671 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 ATP1A2P50993 1020 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 RASSF7Q02833 373 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 ARID5AQ03989 594 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 EML3Q32P44 896 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 DACT2Q5SW24 774 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 NAA16Q6N069 864 aaPredicted RBP9.48□□□□□ -0.89
SCARB2-220ENST00000640076 CCDC129Q6ZRS4 1044 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 CERS5Q8N5B7 392 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 LSG1Q9H089 658 aaKnown RBP9.48□□□□□ -0.89
SCARB2-220ENST00000640076 PUS7LQ9H0K6 701 aaKnown RBP9.48□□□□□ -0.89
SCARB2-220ENST00000640076 CCDC171Q6TFL3 1326 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 PEX14O75381 377 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 YBX3P16989 372 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCARB2-220ENST00000640076 CYP7A1P22680 504 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 PRELPP51888 382 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 KIAA1211Q6ZU35 1233 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 ADGRA1Q86SQ6 560 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
SCARB2-220ENST00000640076 NIM1KQ8IY84 436 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 SIX5Q8N196 739 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 USP26Q9BXU7 913 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 ZNRF3Q9ULT6 936 aa9.48□□□□□ -0.89
SCARB2-220ENST00000640076 MYH2Q9UKX2 1941 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 CCDC194A0A1B0GVG4 234 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 GPAA1O43292 621 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 EPB41L2O43491 1005 aaKnown RBP9.47□□□□□ -0.89
SCARB2-220ENST00000640076 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
SCARB2-220ENST00000640076 MCCP23508 829 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 FKBP1AP62942 108 aaKnown RBP9.47□□□□□ -0.89
SCARB2-220ENST00000640076 PTH1RQ03431 593 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 ARHGAP27Q6ZUM4 889 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 TBC1D32Q96NH3 1257 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 MXD3Q9BW11 206 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 COL4A3BPQ9Y5P4 624 aa9.47□□□□□ -0.89
SCARB2-220ENST00000640076 SBF1O95248 1867 aa9.46□□□□□ -0.89
SCARB2-220ENST00000640076 SEC13P55735 322 aa9.46□□□□□ -0.89
SCARB2-220ENST00000640076 JDP2Q8WYK2 163 aa9.46□□□□□ -0.89
SCARB2-220ENST00000640076 DUSP9Q99956 384 aaKnown RBP9.46□□□□□ -0.89
SCARB2-220ENST00000640076 C22orf23Q9BZE7 217 aa9.46□□□□□ -0.89
SCARB2-220ENST00000640076 MRPL42Q9Y6G3 142 aaKnown RBP9.46□□□□□ -0.89
SCARB2-220ENST00000640076 DICER1Q9UPY3 1922 aaKnown RBP9.46□□□□□ -0.9
SCARB2-220ENST00000640076 RAD17O75943 681 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 MBD4O95243 580 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 GSTO1P78417 241 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 DAB2P98082 770 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 VPS53Q5VIR6 699 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 MIGA1Q8NAN2 632 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 MAP4K1Q92918 833 aa9.46□□□□□ -0.9
SCARB2-220ENST00000640076 AIDAQ96BJ3 306 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms