RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MYH1P12882 1939 aa17.42■□□□□ 0.38
TRIM3-215ENST00000639856 CCDC196A0A1B0GTZ2 297 aa17.42■□□□□ 0.38
TRIM3-215ENST00000639856 IFIT1BQ5T764 474 aaKnown RBP17.42■□□□□ 0.38
TRIM3-215ENST00000639856 C11orf57Q6ZUT1 292 aaPredicted RBP17.42■□□□□ 0.38
TRIM3-215ENST00000639856 PIBF1Q8WXW3 757 aa17.42■□□□□ 0.38
TRIM3-215ENST00000639856 ANO10Q9NW15 660 aa17.42■□□□□ 0.38
TRIM3-215ENST00000639856 ROBO3Q96MS0 1386 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 ZNF646O15015 1829 aaPredicted RBP17.41■□□□□ 0.38
TRIM3-215ENST00000639856 CMA1P23946 247 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 AOC3Q16853 763 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 PLA2G4DQ86XP0 818 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 TRIM22Q8IYM9 498 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 CCDC82Q8N4S0 544 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 FANCBQ8NB91 859 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 SPC24Q8NBT2 197 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 MYH6P13533 1939 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 TSPY2A6NKD2 308 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 C21orf2O43822 256 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 PPP6R2O75170 966 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 PLCG2P16885 1265 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRIM3-215ENST00000639856 SUGT1Q9Y2Z0 365 aa17.41■□□□□ 0.38
TRIM3-215ENST00000639856 GOLGA6L19H0YKK7 550 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 ECE2O60344 883 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 PTPAQ15257 358 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 PODNQ7Z5L7 613 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.4■□□□□ 0.38
TRIM3-215ENST00000639856 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 CERS3Q8IU89 383 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 TRIM5Q9C035 493 aa17.4■□□□□ 0.38
TRIM3-215ENST00000639856 WDHD1O75717 1129 aaPredicted RBP17.39■□□□□ 0.38
TRIM3-215ENST00000639856 ZNF202O95125 648 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 GUCY1A2P33402 732 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 ZNF75DP51815 510 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 TERF1P54274 439 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 PPP2R5BQ15173 497 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 AMOTL1Q8IY63 956 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 CRACR2BQ8N4Y2 399 aaPredicted RBP17.39■□□□□ 0.38
TRIM3-215ENST00000639856 JMYQ8N9B5 988 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 MAP3K14Q99558 947 aa17.39■□□□□ 0.38
TRIM3-215ENST00000639856 DEXIO95424 95 aa17.39■□□□□ 0.37
TRIM3-215ENST00000639856 MMP1P03956 469 aa17.39■□□□□ 0.37
TRIM3-215ENST00000639856 MARCKSP29966 332 aaPredicted RBP17.39■□□□□ 0.37
TRIM3-215ENST00000639856 TFAP4Q01664 338 aa17.39■□□□□ 0.37
TRIM3-215ENST00000639856 KIAA1468Q9P260 1216 aa17.39■□□□□ 0.37
TRIM3-215ENST00000639856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.38■□□□□ 0.37
TRIM3-215ENST00000639856 PFKFB1P16118 471 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 DPEP1P16444 411 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 TROAPQ12815 778 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 PICALMQ13492 652 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 SARM1Q6SZW1 724 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
TRIM3-215ENST00000639856 IL17RBQ9NRM6 502 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 ZBTB7AO95365 584 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 KCNA3P22001 575 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 SAFBQ15424 915 aaKnown RBP eCLIP17.38■□□□□ 0.37
TRIM3-215ENST00000639856 RCSD1Q6JBY9 416 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 CATIPQ7Z7H3 387 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 NOSTRINQ8IVI9 506 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 CEP57L1Q8IYX8 460 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 ERCC4Q92889 916 aaPredicted RBP17.38■□□□□ 0.37
TRIM3-215ENST00000639856 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 PCDHAC2Q9Y5I4 1007 aa17.38■□□□□ 0.37
TRIM3-215ENST00000639856 USP17L3A6NCW0 530 aa17.37■□□□□ 0.37
TRIM3-215ENST00000639856 USP17L4A6NCW7 530 aa17.37■□□□□ 0.37
TRIM3-215ENST00000639856 NOLC1Q14978 699 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRIM3-215ENST00000639856 DACT2Q5SW24 774 aa17.37■□□□□ 0.37
TRIM3-215ENST00000639856 USP17L1Q7RTZ2 530 aa17.37■□□□□ 0.37
TRIM3-215ENST00000639856 KIAA0825Q8IV33 1275 aa17.37■□□□□ 0.37
TRIM3-215ENST00000639856 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
TRIM3-215ENST00000639856 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
TRIM3-215ENST00000639856 DDX4Q9NQI0 724 aaKnown RBP17.37■□□□□ 0.37
TRIM3-215ENST00000639856 R3HCC1Q9Y3T6 440 aaKnown RBP17.37■□□□□ 0.37
TRIM3-215ENST00000639856 A0A087WWV3 80 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 BECN2A8MW95 431 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 PLEKHA8P1O95397 391 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 TPM2P07951 284 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 RASA1P20936 1047 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
TRIM3-215ENST00000639856 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
TRIM3-215ENST00000639856 TTLL6Q8N841 843 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 TIGD1Q96MW7 591 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 FOXP1Q9H334 677 aaPredicted RBP17.36■□□□□ 0.37
TRIM3-215ENST00000639856 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 CDC25BP30305 580 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 STRIP1Q5VSL9 837 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
TRIM3-215ENST00000639856 RNF26Q9BY78 433 aaPredicted RBP17.36■□□□□ 0.37
TRIM3-215ENST00000639856 KCNJ14Q9UNX9 436 aa17.36■□□□□ 0.37
TRIM3-215ENST00000639856 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
TRIM3-215ENST00000639856 FAM237AA0A1B0GTK4 181 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 SYKP43405 635 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 CDK8P49336 464 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 CDC42EP5Q6NZY7 148 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 SHC4Q6S5L8 630 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 C16orf86Q6ZW13 317 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms