RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
SPIN3-228ENST00000639794 MCOLN1Q9GZU1 580 aa20.09■□□□□ 0.81
SPIN3-228ENST00000639794 INCENPQ9NQS7 918 aa20.09■□□□□ 0.81
SPIN3-228ENST00000639794 GINM1Q9NU53 330 aa20.09■□□□□ 0.81
SPIN3-228ENST00000639794 PPARAQ07869 468 aa20.08■□□□□ 0.81
SPIN3-228ENST00000639794 TMEM179Q6ZVK1 233 aa20.08■□□□□ 0.81
SPIN3-228ENST00000639794 RAD21O60216 631 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 HSPD1P10809 573 aaKnown RBP20.07■□□□□ 0.8
SPIN3-228ENST00000639794 CAP1Q01518 475 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 PROCA1Q8NCQ7 364 aaPredicted RBP20.07■□□□□ 0.8
SPIN3-228ENST00000639794 ZCCHC17Q9NP64 241 aaKnown RBP20.07■□□□□ 0.8
SPIN3-228ENST00000639794 EMILIN3Q9NT22 766 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 RASA1P20936 1047 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 HAND2P61296 217 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 ICA1Q05084 483 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 TRIM17Q9Y577 477 aa20.07■□□□□ 0.8
SPIN3-228ENST00000639794 A0A1W2PRG0 241 aa20.06■□□□□ 0.8
SPIN3-228ENST00000639794 C19orf81C9J6K1 198 aa20.06■□□□□ 0.8
SPIN3-228ENST00000639794 FGAP02671 866 aa20.06■□□□□ 0.8
SPIN3-228ENST00000639794 SH3D19Q5HYK7 790 aa20.06■□□□□ 0.8
SPIN3-228ENST00000639794 CTU1Q7Z7A3 348 aaKnown RBP20.06■□□□□ 0.8
SPIN3-228ENST00000639794 ARHGAP39Q9C0H5 1083 aa20.06■□□□□ 0.8
SPIN3-228ENST00000639794 IL25Q9H293 177 aa20.06■□□□□ 0.8
SPIN3-228ENST00000639794 ROBO3Q96MS0 1386 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 HIP1O00291 1037 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 PEX10O60683 326 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 IRX3P78415 501 aaPredicted RBP20.05■□□□□ 0.8
SPIN3-228ENST00000639794 FAM47AQ5JRC9 791 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 USP17L2Q6R6M4 530 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 ZNF444Q8N0Y2 327 aaPredicted RBP20.05■□□□□ 0.8
SPIN3-228ENST00000639794 CCDC17Q96LX7 622 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 ASCC2Q9H1I8 757 aaPredicted RBP20.05■□□□□ 0.8
SPIN3-228ENST00000639794 TOMM22Q9NS69 142 aa20.05■□□□□ 0.8
SPIN3-228ENST00000639794 SLC3A2P08195 630 aaKnown RBP20.04■□□□□ 0.8
SPIN3-228ENST00000639794 NOM1Q5C9Z4 860 aaKnown RBP20.04■□□□□ 0.8
SPIN3-228ENST00000639794 SAMD1Q6SPF0 538 aaPredicted RBP20.04■□□□□ 0.8
SPIN3-228ENST00000639794 C17orf99Q6UX52 265 aa20.04■□□□□ 0.8
SPIN3-228ENST00000639794 SPICE1Q8N0Z3 855 aa20.04■□□□□ 0.8
SPIN3-228ENST00000639794 ERO1AQ96HE7 468 aa20.04■□□□□ 0.8
SPIN3-228ENST00000639794 HTTP42858 3142 aa20.04■□□□□ 0.8
SPIN3-228ENST00000639794 OSBPP22059 807 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 MFAP1P55081 439 aaKnown RBP20.03■□□□□ 0.8
SPIN3-228ENST00000639794 PDE4BQ07343 736 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 ANKRD13CQ8N6S4 541 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 ARHGEF10LQ9HCE6 1279 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 PNMA3Q9UL41 463 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 MYH4Q9Y623 1939 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 EEF2P13639 858 aaKnown RBP20.03■□□□□ 0.8
SPIN3-228ENST00000639794 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.8
SPIN3-228ENST00000639794 RRP12Q5JTH9 1297 aaKnown RBP20.03■□□□□ 0.8
SPIN3-228ENST00000639794 OTOP1Q7RTM1 612 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 CHMP4CQ96CF2 233 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 KIAA1683Q9H0B3 1180 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 TACC3Q9Y6A5 838 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 ADGRA2Q96PE1 1338 aa20.03■□□□□ 0.8
SPIN3-228ENST00000639794 VCAM1P19320 739 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 CHMLP26374 656 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 USP14P54578 494 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 KIAA1755Q5JYT7 1200 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 SIAH1Q8IUQ4 282 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.8
SPIN3-228ENST00000639794 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.02■□□□□ 0.8
SPIN3-228ENST00000639794 EFCC1Q9HA90 598 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 ZNF287Q9HBT7 754 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 SLC45A1Q9Y2W3 748 aa20.02■□□□□ 0.8
SPIN3-228ENST00000639794 TSPY3P0CV98 308 aa20.01■□□□□ 0.79
SPIN3-228ENST00000639794 TSPY8P0CW00 308 aa20.01■□□□□ 0.79
SPIN3-228ENST00000639794 LACTBP83111 547 aaPredicted RBP20.01■□□□□ 0.79
SPIN3-228ENST00000639794 KIF22Q14807 665 aa20.01■□□□□ 0.79
SPIN3-228ENST00000639794 TICAM2Q86XR7 235 aa20.01■□□□□ 0.79
SPIN3-228ENST00000639794 ABHD8Q96I13 439 aa20.01■□□□□ 0.79
SPIN3-228ENST00000639794 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
SPIN3-228ENST00000639794 RANBP6O60518 1105 aaKnown RBP20■□□□□ 0.79
SPIN3-228ENST00000639794 CTGFP29279 349 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 TFAP4Q01664 338 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 ALX1Q15699 326 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 TANGO6Q9C0B7 1094 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 KANSL2Q9H9L4 492 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 MGAMO43451 1857 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 GREB1LQ9C091 1923 aaPredicted RBP20■□□□□ 0.79
SPIN3-228ENST00000639794 DOCK3Q8IZD9 2030 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 FMNL1O95466 1100 aaPredicted RBP20■□□□□ 0.79
SPIN3-228ENST00000639794 BCRP11274 1271 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 PSMC4P43686 418 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 CEP95Q96GE4 821 aa20■□□□□ 0.79
SPIN3-228ENST00000639794 TSPY2A6NKD2 308 aa19.99■□□□□ 0.79
SPIN3-228ENST00000639794 CLIP2Q9UDT6 1046 aa19.99■□□□□ 0.79
SPIN3-228ENST00000639794 TAOK2Q9UL54 1235 aa19.99■□□□□ 0.79
SPIN3-228ENST00000639794 CCDC85CA6NKD9 419 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 NMT2O60551 498 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 HOXA7P31268 230 aaPredicted RBP19.98■□□□□ 0.79
SPIN3-228ENST00000639794 HERVK_113P62684 666 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 TBC1D10CQ8IV04 446 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 LRRC47Q8N1G4 583 aaKnown RBP19.98■□□□□ 0.79
SPIN3-228ENST00000639794 TRIM47Q96LD4 638 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 C12orf42Q96LP6 360 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 TMX2Q9Y320 296 aa19.98■□□□□ 0.79
SPIN3-228ENST00000639794 USP17L15C9J2P7 530 aa19.97■□□□□ 0.79
SPIN3-228ENST00000639794 USP17L13C9JLJ4 530 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms