RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 POLR3DP05423 398 aaPredicted RBP20.44■□□□□ 0.86
SMN2-216ENST00000638794 MAPK4P31152 587 aa20.44■□□□□ 0.86
SMN2-216ENST00000638794 EVX2Q03828 476 aa20.44■□□□□ 0.86
SMN2-216ENST00000638794 ACER1Q8TDN7 264 aa20.44■□□□□ 0.86
SMN2-216ENST00000638794 SOCS4Q8WXH5 440 aa20.44■□□□□ 0.86
SMN2-216ENST00000638794 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
SMN2-216ENST00000638794 PAWRQ96IZ0 340 aaKnown RBP20.44■□□□□ 0.86
SMN2-216ENST00000638794 NUDT12Q9BQG2 462 aa20.44■□□□□ 0.86
SMN2-216ENST00000638794 CRNKL1Q9BZJ0 848 aaKnown RBP20.44■□□□□ 0.86
SMN2-216ENST00000638794 HMX1Q9NP08 348 aaPredicted RBP20.44■□□□□ 0.86
SMN2-216ENST00000638794 NR2E3Q9Y5X4 410 aa20.44■□□□□ 0.86
SMN2-216ENST00000638794 MYH8P13535 1937 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 RAB11FIP3O75154 756 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 USP14P54578 494 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 GABPAQ06546 454 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 DIS3LQ8TF46 1054 aaKnown RBP20.43■□□□□ 0.86
SMN2-216ENST00000638794 SDR42E1Q8WUS8 393 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 KIAA1683Q9H0B3 1180 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 CABP5Q9NP86 173 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 MCM9Q9NXL9 1143 aa20.43■□□□□ 0.86
SMN2-216ENST00000638794 RBM27Q9P2N5 1060 aaKnown RBP20.43■□□□□ 0.86
SMN2-216ENST00000638794 USP17L15C9J2P7 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L13C9JLJ4 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L11C9JVI0 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L18D6R9N7 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L22D6RA61 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L17D6RBQ6 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L19D6RCP7 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L20D6RJB6 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 XRCC5P13010 732 aaKnown RBP20.42■□□□□ 0.86
SMN2-216ENST00000638794 VCAM1P19320 739 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 GUCY1A2P33402 732 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 USP17L24Q0WX57 530 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 PDE3AQ14432 1141 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 CCAR1Q8IX12 1150 aaKnown RBP20.42■□□□□ 0.86
SMN2-216ENST00000638794 LCORLQ8N3X6 602 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 MYH7P12883 1935 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 LAMA3Q16787 3333 aa20.42■□□□□ 0.86
SMN2-216ENST00000638794 BAZ2AQ9UIF9 1905 aaKnown RBP20.41■□□□□ 0.86
SMN2-216ENST00000638794 EVI5O60447 810 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 CNMDO75829 334 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 PRKAR2AP13861 404 aaKnown RBP20.41■□□□□ 0.86
SMN2-216ENST00000638794 MAP3K21Q5TCX8 1036 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 CATSPERGQ6ZRH7 1159 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 NECAB2Q7Z6G3 386 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 ANKLE1Q8NAG6 615 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 USP6NLQ92738 828 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 DCP1AQ9NPI6 582 aaPredicted RBP20.41■□□□□ 0.86
SMN2-216ENST00000638794 PAG1Q9NWQ8 432 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 RABGAP1Q9Y3P9 1069 aa20.41■□□□□ 0.86
SMN2-216ENST00000638794 ZKSCAN1P17029 563 aaPredicted RBP20.4■□□□□ 0.86
SMN2-216ENST00000638794 SEPT2Q15019 361 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 SLFNL1Q499Z3 407 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 MORN1Q5T089 497 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 PLEKHH3Q7Z736 793 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 PRO3102Q9H379 93 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 BOLA2Q9H3K6 86 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 CHMP4BQ9H444 224 aaKnown RBP20.4■□□□□ 0.86
SMN2-216ENST00000638794 ARMT1Q9H993 441 aa20.4■□□□□ 0.86
SMN2-216ENST00000638794 CYP2D6P10635 497 aa20.39■□□□□ 0.85
SMN2-216ENST00000638794 RGS2P41220 211 aa20.39■□□□□ 0.85
SMN2-216ENST00000638794 RPAP3Q9H6T3 665 aaPredicted RBP20.39■□□□□ 0.85
SMN2-216ENST00000638794 MPHOSPH10O00566 681 aaKnown RBP20.38■□□□□ 0.85
SMN2-216ENST00000638794 MBD4O95243 580 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 ATP5JP18859 108 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 ADD2P35612 726 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 MNX1P50219 401 aaPredicted RBP20.38■□□□□ 0.85
SMN2-216ENST00000638794 CCNA1P78396 465 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 CCL14Q16627 93 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 C20orf194Q5TEA3 1177 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 TRMT44Q8IYL2 757 aaKnown RBP20.38■□□□□ 0.85
SMN2-216ENST00000638794 SLC44A5Q8NCS7 719 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 APBA2Q99767 749 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 CWC22Q9HCG8 908 aaKnown RBP20.38■□□□□ 0.85
SMN2-216ENST00000638794 OGDHLQ9ULD0 1010 aa20.38■□□□□ 0.85
SMN2-216ENST00000638794 A0A1W2PRG0 241 aa20.37■□□□□ 0.85
SMN2-216ENST00000638794 SPDYE16A6NNV3 312 aaPredicted RBP20.37■□□□□ 0.85
SMN2-216ENST00000638794 CACNB2Q08289 660 aaPredicted RBP20.37■□□□□ 0.85
SMN2-216ENST00000638794 LBX2Q6XYB7 198 aa20.37■□□□□ 0.85
SMN2-216ENST00000638794 HAUS7Q99871 368 aa20.37■□□□□ 0.85
SMN2-216ENST00000638794 BTBD7Q9P203 1132 aa20.37■□□□□ 0.85
SMN2-216ENST00000638794 RLFQ13129 1914 aa20.37■□□□□ 0.85
SMN2-216ENST00000638794 PRKAB2O43741 272 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 CHGBP05060 677 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 WDR78Q5VTH9 848 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 DYNLL2Q96FJ2 89 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.36■□□□□ 0.85
SMN2-216ENST00000638794 NBPF3Q9H094 633 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 FRMPD3Q5JV73 1810 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 A0A0G2JMZ2 1700 aa20.36■□□□□ 0.85
SMN2-216ENST00000638794 MAP2K5Q13163 448 aa20.35■□□□□ 0.85
SMN2-216ENST00000638794 SWAP70Q9UH65 585 aa20.35■□□□□ 0.85
SMN2-216ENST00000638794 GLRX3O76003 335 aaKnown RBP20.34■□□□□ 0.85
SMN2-216ENST00000638794 CCND3P30281 292 aaPredicted RBP20.34■□□□□ 0.85
SMN2-216ENST00000638794 TMEM179Q6ZVK1 233 aa20.34■□□□□ 0.85
SMN2-216ENST00000638794 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
SMN2-216ENST00000638794 C11orf49Q9H6J7 331 aa20.34■□□□□ 0.85
SMN2-216ENST00000638794 ATP8A2Q9NTI2 1148 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms