RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TLR2O60603 784 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 PRDM1O75626 825 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 FGAP02671 866 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 PPARAQ07869 468 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 ZYXQ15942 572 aaKnown RBP25.99■■□□□ 1.75
SCN1B-206ENST00000638536 AGTPBP1Q9UPW5 1226 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 FKTNO75072 461 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 CTDSPL2Q05D32 466 aa25.99■■□□□ 1.75
SCN1B-206ENST00000638536 PROCA1Q8NCQ7 364 aaPredicted RBP25.99■■□□□ 1.75
SCN1B-206ENST00000638536 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.99■■□□□ 1.75
SCN1B-206ENST00000638536 ADGRA2Q96PE1 1338 aa25.98■■□□□ 1.75
SCN1B-206ENST00000638536 TMEM179Q6ZVK1 233 aa25.98■■□□□ 1.75
SCN1B-206ENST00000638536 CPA4Q9UI42 421 aa25.98■■□□□ 1.75
SCN1B-206ENST00000638536 TAOK2Q9UL54 1235 aa25.98■■□□□ 1.75
SCN1B-206ENST00000638536 ALX1Q15699 326 aa25.97■■□□□ 1.75
SCN1B-206ENST00000638536 CCDC17Q96LX7 622 aa25.97■■□□□ 1.75
SCN1B-206ENST00000638536 MKNK2Q9HBH9 465 aa25.97■■□□□ 1.75
SCN1B-206ENST00000638536 C19orf81C9J6K1 198 aa25.96■■□□□ 1.75
SCN1B-206ENST00000638536 CHMLP26374 656 aa25.96■■□□□ 1.75
SCN1B-206ENST00000638536 C17orf99Q6UX52 265 aa25.96■■□□□ 1.75
SCN1B-206ENST00000638536 TNS4Q8IZW8 715 aa25.96■■□□□ 1.75
SCN1B-206ENST00000638536 HIP1O00291 1037 aa25.96■■□□□ 1.75
SCN1B-206ENST00000638536 SP3Q02447 781 aa25.95■■□□□ 1.74
SCN1B-206ENST00000638536 CD99L2Q8TCZ2 262 aa25.95■■□□□ 1.74
SCN1B-206ENST00000638536 FEZ1Q99689 392 aa25.95■■□□□ 1.74
SCN1B-206ENST00000638536 TMOD4Q9NZQ9 345 aa25.95■■□□□ 1.74
SCN1B-206ENST00000638536 SLC45A1Q9Y2W3 748 aa25.95■■□□□ 1.74
SCN1B-206ENST00000638536 ECM2O94769 699 aaPredicted RBP25.94■■□□□ 1.74
SCN1B-206ENST00000638536 KIAA1755Q5JYT7 1200 aa25.94■■□□□ 1.74
SCN1B-206ENST00000638536 KIAA1683Q9H0B3 1180 aa25.94■■□□□ 1.74
SCN1B-206ENST00000638536 USP17L2Q6R6M4 530 aa25.93■■□□□ 1.74
SCN1B-206ENST00000638536 PARK7Q99497 189 aaKnown RBP25.93■■□□□ 1.74
SCN1B-206ENST00000638536 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.93■■□□□ 1.74
SCN1B-206ENST00000638536 DOCK3Q8IZD9 2030 aa25.93■■□□□ 1.74
SCN1B-206ENST00000638536 HAND2P61296 217 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 ICA1Q05084 483 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 ARHGAP39Q9C0H5 1083 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 NBPF3Q9H094 633 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 ASCC2Q9H1I8 757 aaPredicted RBP25.92■■□□□ 1.74
SCN1B-206ENST00000638536 ANAPC4Q9UJX5 808 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 MYH4Q9Y623 1939 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 EEF2P13639 858 aaKnown RBP25.92■■□□□ 1.74
SCN1B-206ENST00000638536 CTGFP29279 349 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 FAM47AQ5JRC9 791 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 NKX2-3Q8TAU0 364 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 C12orf42Q96LP6 360 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 MCOLN1Q9GZU1 580 aa25.92■■□□□ 1.74
SCN1B-206ENST00000638536 PEX10O60683 326 aa25.91■■□□□ 1.74
SCN1B-206ENST00000638536 BCRP11274 1271 aa25.91■■□□□ 1.74
SCN1B-206ENST00000638536 MFAP1P55081 439 aaKnown RBP25.91■■□□□ 1.74
SCN1B-206ENST00000638536 CTU1Q7Z7A3 348 aaKnown RBP25.91■■□□□ 1.74
SCN1B-206ENST00000638536 ZNF444Q8N0Y2 327 aaPredicted RBP25.91■■□□□ 1.74
SCN1B-206ENST00000638536 ZMYM6O95789 1325 aa25.9■■□□□ 1.74
SCN1B-206ENST00000638536 VCAM1P19320 739 aa25.9■■□□□ 1.74
SCN1B-206ENST00000638536 HOXA7P31268 230 aaPredicted RBP25.9■■□□□ 1.74
SCN1B-206ENST00000638536 PDE4BQ07343 736 aa25.9■■□□□ 1.74
SCN1B-206ENST00000638536 POTEEQ6S8J3 1075 aa25.9■■□□□ 1.74
SCN1B-206ENST00000638536 P2RX7Q99572 595 aaKnown RBP25.9■■□□□ 1.74
SCN1B-206ENST00000638536 PPP4R2Q9NY27 417 aa25.9■■□□□ 1.74
SCN1B-206ENST00000638536 TMX2Q9Y320 296 aa25.9■■□□□ 1.74
SCN1B-206ENST00000638536 LAMA4Q16363 1823 aa25.89■■□□□ 1.74
SCN1B-206ENST00000638536 MGAMO43451 1857 aa25.89■■□□□ 1.74
SCN1B-206ENST00000638536 IGKV6D-41A0A0C4DH26 115 aa25.89■■□□□ 1.74
SCN1B-206ENST00000638536 ATP2B2Q01814 1243 aa25.89■■□□□ 1.74
SCN1B-206ENST00000638536 KANSL2Q9H9L4 492 aa25.89■■□□□ 1.74
SCN1B-206ENST00000638536 USP14P54578 494 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 SMCR8Q8TEV9 937 aaPredicted RBP25.88■■□□□ 1.73
SCN1B-206ENST00000638536 BRCA2P51587 3418 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 RLFQ13129 1914 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 SLC3A2P08195 630 aaKnown RBP25.88■■□□□ 1.73
SCN1B-206ENST00000638536 FGRP09769 529 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 LACTBP83111 547 aaPredicted RBP25.88■■□□□ 1.73
SCN1B-206ENST00000638536 TFAP4Q01664 338 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 OTOP1Q7RTM1 612 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 TBC1D10CQ8IV04 446 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 ERO1AQ96HE7 468 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 DSCC1Q9BVC3 393 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 ZNF287Q9HBT7 754 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 TRIM17Q9Y577 477 aa25.88■■□□□ 1.73
SCN1B-206ENST00000638536 OSBPP22059 807 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 PTH1RQ03431 593 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 BMP2KLQ5H9B9 411 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 ERICH6BQ5W0A0 696 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 SPICE1Q8N0Z3 855 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 ANKRD13CQ8N6S4 541 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 CEP95Q96GE4 821 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 ARHGEF10LQ9HCE6 1279 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 PNMA3Q9UL41 463 aa25.87■■□□□ 1.73
SCN1B-206ENST00000638536 PABPC4Q13310 644 aaKnown RBP eCLIP25.86■■□□□ 1.73
SCN1B-206ENST00000638536 NEDD1Q8NHV4 660 aa25.86■■□□□ 1.73
SCN1B-206ENST00000638536 RPAP3Q9H6T3 665 aaPredicted RBP25.86■■□□□ 1.73
SCN1B-206ENST00000638536 SGSM2O43147 1006 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 NMT2O60551 498 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 TSPY3P0CV98 308 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 TSPY8P0CW00 308 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 IRX3P78415 501 aaPredicted RBP25.85■■□□□ 1.73
SCN1B-206ENST00000638536 CATSPERGQ6ZRH7 1159 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 PARP14Q460N5 1801 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 ORC4O43929 436 aa25.85■■□□□ 1.73
SCN1B-206ENST00000638536 HERVK_113P62684 666 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 214.4 ms