RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 TMEM179Q6ZVK1 233 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 CCDC17Q96LX7 622 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 FEZ1Q99689 392 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 EFCC1Q9HA90 598 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 HELLSQ9NRZ9 838 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 CPA4Q9UI42 421 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 TRIM17Q9Y577 477 aa17.39■□□□□ 0.37
KCNMA1-239ENST00000638531 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 PATL2C9JE40 543 aaKnown RBP17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 CAP1Q01518 475 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 SEPT2Q15019 361 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 USP17L2Q6R6M4 530 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 IFNL3Q8IZI9 196 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 SMCR8Q8TEV9 937 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 KIAA1683Q9H0B3 1180 aa17.38■□□□□ 0.37
KCNMA1-239ENST00000638531 A0A0D9SFI3 127 aa17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 MPHOSPH10O00566 681 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 AKR1B1P15121 316 aa17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 PDE4AP27815 886 aa17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 HOXA7P31268 230 aaPredicted RBP17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 USP14P54578 494 aa17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 KIF22Q14807 665 aa17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-239ENST00000638531 FOXP2O15409 715 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 GNRH1P01148 92 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 APPP05067 770 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 OSBPP22059 807 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 FAM227BQ96M60 508 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 NAPBQ9H115 298 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 ASCC2Q9H1I8 757 aaPredicted RBP17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 EMILIN3Q9NT22 766 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 HPS5Q9UPZ3 1129 aa17.36■□□□□ 0.37
KCNMA1-239ENST00000638531 MINDY4BA8MYZ0 360 aa17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 GCLCP48506 637 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 IRX3P78415 501 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 NMIQ13287 307 aaPredicted RBP17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 FAM110CQ1W6H9 321 aa17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 ARHGAP39Q9C0H5 1083 aa17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 ZMYM6O95789 1325 aa17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 PLIN4Q96Q06 1357 aa17.35■□□□□ 0.37
KCNMA1-239ENST00000638531 RASA1P20936 1047 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 ICA1Q05084 483 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 ZYXQ15942 572 aaKnown RBP17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 TTC22Q5TAA0 569 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 CCDC171Q6TFL3 1326 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 SH2D4AQ9H788 454 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 ARHGEF10LQ9HCE6 1279 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
KCNMA1-239ENST00000638531 ZNF236Q9UL36 1845 aa17.33■□□□□ 0.37
KCNMA1-239ENST00000638531 A0A1W2PRG0 241 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 HIP1O00291 1037 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 VCAM1P19320 739 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 SDSP20132 328 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 CTGFP29279 349 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 PRMT2P55345 433 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 CLEC10AQ8IUN9 316 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 GTF3C2Q8WUA4 911 aaPredicted RBP17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 TRIM47Q96LD4 638 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 ZNF287Q9HBT7 754 aa17.33■□□□□ 0.36
KCNMA1-239ENST00000638531 SLC3A2P08195 630 aaKnown RBP17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 PSMC4P43686 418 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 HERVK_113P62684 666 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 PPARAQ07869 468 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 ALX1Q15699 326 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 VPS53Q5VIR6 699 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 ZNF589Q86UQ0 364 aaPredicted RBP17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 ANKRD13CQ8N6S4 541 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 MKNK2Q9HBH9 465 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 MORF4L1Q9UBU8 362 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 CENPFP49454 3210 aa17.32■□□□□ 0.36
KCNMA1-239ENST00000638531 KIAA0100Q14667 2235 aaKnown RBP17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L15C9J2P7 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L13C9JLJ4 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L11C9JVI0 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L18D6R9N7 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L22D6RA61 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L17D6RBQ6 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L19D6RCP7 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L20D6RJB6 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 FCGRTP55899 365 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 USP17L24Q0WX57 530 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 LPAR1Q92633 364 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 KANSL2Q9H9L4 492 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 TMX2Q9Y320 296 aa17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 ZNFX1Q9P2E3 1918 aaKnown RBP17.31■□□□□ 0.36
KCNMA1-239ENST00000638531 FMNL1O95466 1100 aaPredicted RBP17.3■□□□□ 0.36
KCNMA1-239ENST00000638531 PDE4BQ07343 736 aa17.3■□□□□ 0.36
KCNMA1-239ENST00000638531 SIAH1Q8IUQ4 282 aa17.3■□□□□ 0.36
KCNMA1-239ENST00000638531 STK11IPQ8N1F8 1099 aa17.3■□□□□ 0.36
KCNMA1-239ENST00000638531 VCPKMTQ9H867 229 aa17.3■□□□□ 0.36
KCNMA1-239ENST00000638531 SRRDQ9UH36 339 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms