RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 SPECC1LQ69YQ0 1117 aa13.7□□□□□ -0.22
GFAP-228ENST00000638488 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
GFAP-228ENST00000638488 NAA15Q9BXJ9 866 aaKnown RBP13.7□□□□□ -0.22
GFAP-228ENST00000638488 CAPS2Q9BXY5 557 aa13.7□□□□□ -0.22
GFAP-228ENST00000638488 SH3TC1Q8TE82 1336 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 ANKRD18BA2A2Z9 1011 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 GOLGA6CA6NDK9 693 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 M0R2C6 588 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 BIN1O00499 593 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 RNF113AO15541 343 aaKnown RBP13.69□□□□□ -0.22
GFAP-228ENST00000638488 RTN2O75298 545 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 GOLGA6DP0CG33 693 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 PAX7P23759 505 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 ZAP70P43403 619 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 GRIK3Q13003 919 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 CCDC148Q8NFR7 591 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 INTS13Q9NVM9 706 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 GOLGA6AQ9NYA3 693 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 MAST3O60307 1309 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 MEFVO15553 781 aaPredicted RBP13.69□□□□□ -0.22
GFAP-228ENST00000638488 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 YEATS4O95619 227 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 CSF1RP07333 972 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 SMTNP53814 917 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 CTSWP56202 376 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 TMED8Q6PL24 325 aaPredicted RBP13.69□□□□□ -0.22
GFAP-228ENST00000638488 STOX1Q6ZVD7 989 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 MICALCLQ6ZW33 695 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 HELBQ8NG08 1087 aaPredicted RBP13.69□□□□□ -0.22
GFAP-228ENST00000638488 MAGEC3Q8TD91 643 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 CD248Q9HCU0 757 aa13.69□□□□□ -0.22
GFAP-228ENST00000638488 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
GFAP-228ENST00000638488 MYO1FO00160 1098 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 HSPD1P10809 573 aaKnown RBP13.68□□□□□ -0.22
GFAP-228ENST00000638488 ICA1Q05084 483 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 ZMYM1Q5SVZ6 1142 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 DESI2Q9BSY9 194 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 MYO1AQ9UBC5 1043 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 ADGRG1Q9Y653 693 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 UBN2Q6ZU65 1347 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 RFX7Q2KHR2 1363 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 ZNF202O95125 648 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 FOSBP53539 338 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 INHBEP58166 350 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 CCDC50Q8IVM0 306 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
GFAP-228ENST00000638488 OSBP2Q969R2 916 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 NAPGQ99747 312 aaPredicted RBP13.68□□□□□ -0.22
GFAP-228ENST00000638488 CRACR2AQ9BSW2 395 aa13.68□□□□□ -0.22
GFAP-228ENST00000638488 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.67□□□□□ -0.22
GFAP-228ENST00000638488 TARSL2A2RTX5 802 aaKnown RBP13.67□□□□□ -0.22
GFAP-228ENST00000638488 HAND2P61296 217 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 SKIDA1Q1XH10 827 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
GFAP-228ENST00000638488 PDILTQ8N807 584 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 PLA2G12BQ9BX93 195 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 IRX2Q9BZI1 471 aaPredicted RBP13.67□□□□□ -0.22
GFAP-228ENST00000638488 KLC4Q9NSK0 619 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 ZEB2O60315 1214 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 USP14P54578 494 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 ZNF569Q5MCW4 686 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 ILDR1Q86SU0 546 aaPredicted RBP13.67□□□□□ -0.22
GFAP-228ENST00000638488 SH3GL2Q99962 352 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.67□□□□□ -0.22
GFAP-228ENST00000638488 SPATA31A1Q5TZJ5 1347 aa13.67□□□□□ -0.22
GFAP-228ENST00000638488 RASSF9O75901 435 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 GGCXP38435 758 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 IL6STP40189 918 aaPredicted RBP13.66□□□□□ -0.22
GFAP-228ENST00000638488 TBC1D8BQ0IIM8 1120 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 CEP85LQ5SZL2 805 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 MARCH10Q8NA82 808 aaPredicted RBP13.66□□□□□ -0.22
GFAP-228ENST00000638488 VCPKMTQ9H867 229 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 SLC24A3Q9HC58 644 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 POLR3EQ9NVU0 708 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 FANCLQ9NW38 375 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 RIPOR2Q9Y4F9 1068 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 DOT1LQ8TEK3 1739 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 GOLGA8KD6RF30 607 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 SNAP23O00161 211 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 CRKLP46109 303 aaKnown RBP13.66□□□□□ -0.22
GFAP-228ENST00000638488 GNGT1P63211 74 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 SKOR1P84550 965 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 ADCY2Q08462 1091 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 STK38Q15208 465 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 SF3A1Q15459 793 aaKnown RBP13.66□□□□□ -0.22
GFAP-228ENST00000638488 OLFM4Q6UX06 510 aa13.66□□□□□ -0.22
GFAP-228ENST00000638488 NOA1Q8NC60 698 aaKnown RBP13.66□□□□□ -0.22
GFAP-228ENST00000638488 PDE8AO60658 829 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 CMA1P23946 247 aa13.65□□□□□ -0.22
GFAP-228ENST00000638488 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
GFAP-228ENST00000638488 KCNQ4P56696 695 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms