RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 CAAP1Q9H8G2 361 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 CEMIPQ8WUJ3 1361 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 FOXK2Q01167 660 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 FBXW10Q5XX13 1052 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 VPS37AQ8NEZ2 397 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 PLD4Q96BZ4 506 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 ACTR10Q9NZ32 417 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 MCM8Q9UJA3 840 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
SCARB2-209ENST00000638409 SIPA1L3O60292 1781 aaPredicted RBP9.39□□□□□ -0.91
SCARB2-209ENST00000638409 RNMTO43148 476 aaKnown RBP9.38□□□□□ -0.91
SCARB2-209ENST00000638409 GJB6O95452 261 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 ACBD5Q5T8D3 534 aaPredicted RBP9.38□□□□□ -0.91
SCARB2-209ENST00000638409 MTMR8Q96EF0 704 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 ACSBG1Q96GR2 724 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
SCARB2-209ENST00000638409 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 TMEM95Q3KNT9 176 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 SKAP1Q86WV1 359 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 RELL1Q8IUW5 271 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 SPICE1Q8N0Z3 855 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 IFT43Q96FT9 208 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 NT5C1AQ9BXI3 368 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 LY75O60449 1722 aa9.38□□□□□ -0.91
SCARB2-209ENST00000638409 DXOO77932 396 aaKnown RBP9.37□□□□□ -0.91
SCARB2-209ENST00000638409 TMPOP42166 694 aaKnown RBP9.37□□□□□ -0.91
SCARB2-209ENST00000638409 PSEN2P49810 448 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 SSRP1Q08945 709 aaKnown RBP9.37□□□□□ -0.91
SCARB2-209ENST00000638409 PAPPAQ13219 1627 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 FAM160A2Q8N612 972 aaPredicted RBP9.37□□□□□ -0.91
SCARB2-209ENST00000638409 JMYQ8N9B5 988 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 IL17REQ8NFR9 667 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 RREB1Q92766 1687 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 LGR6Q9HBX8 967 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 ARHGEF10LQ9HCE6 1279 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 ZNF831Q5JPB2 1677 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 APBA3O96018 575 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 PMLP29590 882 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 BAG6P46379 1132 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 FAM83BQ5T0W9 1011 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 IFNL3Q8IZI9 196 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 PIGBQ92521 554 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 CAMKK2Q96RR4 588 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 CDH19Q9H159 772 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 RAB6BQ9NRW1 208 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
SCARB2-209ENST00000638409 MLC1Q15049 377 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 GOLM1Q8NBJ4 401 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 NINJ1Q92982 152 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 HOOK2Q96ED9 719 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 SLC52A2Q9HAB3 445 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 TMOD3Q9NYL9 352 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 USP20Q9Y2K6 914 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-209ENST00000638409 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-209ENST00000638409 GARTP22102 1010 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 CABP4P57796 275 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 MAPRE1Q15691 268 aaKnown RBP9.36□□□□□ -0.91
SCARB2-209ENST00000638409 TNNI3KQ59H18 835 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-209ENST00000638409 TREML1Q86YW5 311 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 RHOVQ96L33 236 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 ANKIB1Q9P2G1 1089 aa9.36□□□□□ -0.91
SCARB2-209ENST00000638409 SLC26A4O43511 780 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 PIN1Q13526 163 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 CCDC24Q8N4L8 307 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 AFAP1L2Q8N4X5 818 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 SMARCC1Q92922 1105 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 RABGEF1Q9UJ41 708 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 F2P00734 622 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 SRGNP10124 158 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 RIPK4P57078 832 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 PSMA6P60900 246 aaKnown RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 SEZ6Q53EL9 994 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 PERM1Q5SV97 790 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 BAP1Q92560 729 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 CICQ96RK0 1608 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 GIPC1O14908 333 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 HNRNPUQ00839 825 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 ITKQ08881 620 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 TCIRG1Q13488 830 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 SLC4A8Q2Y0W8 1093 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 POTEHQ6S545 545 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 ALDH16A1Q8IZ83 802 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 CACTIN-AS1Q8N1I8 211 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 ENOX1Q8TC92 643 aaKnown RBP9.35□□□□□ -0.91
SCARB2-209ENST00000638409 YIPF4Q9BSR8 244 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 ZNF700Q9H0M5 742 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 JADE2Q9NQC1 790 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 ZMYM5Q9UJ78 669 aa9.35□□□□□ -0.91
SCARB2-209ENST00000638409 A6NJY4 79 aa9.34□□□□□ -0.91
SCARB2-209ENST00000638409 PIP5K1CO60331 668 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms