RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 IGKV6D-41A0A0C4DH26 115 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 CLRN2A0PK11 232 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 PTPDC1A2A3K4 754 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 DDTLA6NHG4 134 aaPredicted RBP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 TCP10L2B9ZVM9 353 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 BRD1O95696 1058 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 TROAPQ12815 778 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 TRIM29Q14134 588 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 ABCB5Q2M3G0 1257 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 SUPT20HL1Q3ZLR7 823 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 ASPRV1Q53RT3 343 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 FAM47AQ5JRC9 791 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 GPATCH4Q5T3I0 446 aaKnown RBP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 PNMA8AQ86V59 439 aaPredicted RBP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 NECAB1Q8N987 351 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 ZSCAN16Q9H4T2 348 aaPredicted RBP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC00598-216ENST00000638163 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 TACC3Q9Y6A5 838 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 CNTNAP1P78357 1384 aa12.01□□□□□ -0.49
LINC00598-216ENST00000638163 ADAMTSL1Q8N6G6 1762 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 GLTPD2A6NH11 291 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 DDX11L8A8MPP1 907 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 H3BQV1 296 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 hCG_1984214I3L0E3 225 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 DEXIO95424 95 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 ASNSP08243 561 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 RASA3Q14644 834 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 NBPF9Q3BBW0 867 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 IFFO2Q5TF58 517 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 ATL3Q6DD88 541 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 TEX2Q8IWB9 1127 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 ZNF713Q8N859 430 aaPredicted RBP12□□□□□ -0.49
LINC00598-216ENST00000638163 SPRYD3Q8NCJ5 442 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 MKL1Q969V6 931 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 IL17RBQ9NRM6 502 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 HACL1Q9UJ83 578 aa12□□□□□ -0.49
LINC00598-216ENST00000638163 FMNL1O95466 1100 aaPredicted RBP11.99□□□□□ -0.49
LINC00598-216ENST00000638163 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
LINC00598-216ENST00000638163 SYT1P21579 422 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 CACNB3P54284 484 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 CCT2P78371 535 aaKnown RBP11.99□□□□□ -0.49
LINC00598-216ENST00000638163 TRAF1Q13077 416 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 GRM4Q14833 912 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 TMTC3Q6ZXV5 915 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 STK11IPQ8N1F8 1099 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 SLC44A5Q8NCS7 719 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 NUP133Q8WUM0 1156 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 DCPSQ96C86 337 aaKnown RBP11.99□□□□□ -0.49
LINC00598-216ENST00000638163 CEP95Q96GE4 821 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 DEFB129Q9H1M3 183 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 ARHGEF10LQ9HCE6 1279 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 INCENPQ9NQS7 918 aa11.99□□□□□ -0.49
LINC00598-216ENST00000638163 ORC3Q9UBD5 711 aaPredicted RBP11.99□□□□□ -0.49
LINC00598-216ENST00000638163 MPHOSPH10O00566 681 aaKnown RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 CTNND1O60716 968 aaKnown RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 PARP1P09874 1014 aaKnown RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 ICA1Q05084 483 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 ST3GAL1Q11201 340 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 NTRK3Q16288 839 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 TBC1D10BQ4KMP7 808 aaPredicted RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 SULF1Q8IWU6 871 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 GMCL1P1Q8NEA9 526 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 CCDC12Q8WUD4 166 aaPredicted RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 TMEM47Q9BQJ4 181 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 SPZ1Q9BXG8 430 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 ZNF341Q9BYN7 854 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 DNAJC18Q9H819 358 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 PCDHAC2Q9Y5I4 1007 aa11.98□□□□□ -0.49
LINC00598-216ENST00000638163 GREB1LQ9C091 1923 aaPredicted RBP11.98□□□□□ -0.49
LINC00598-216ENST00000638163 UNCXA6NJT0 531 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 SNHG28P0DPA3 235 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 AKR1B1P15121 316 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 NF2P35240 595 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 SAFBQ15424 915 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00598-216ENST00000638163 SLC4A8Q2Y0W8 1093 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 GALNT17Q6IS24 598 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 BRAPQ7Z569 592 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 USP48Q86UV5 1035 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 C8orf76Q96K31 380 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 NCOA5Q9HCD5 579 aaKnown RBP11.97□□□□□ -0.49
LINC00598-216ENST00000638163 BRMS1Q9HCU9 246 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 GOPCQ9HD26 462 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
LINC00598-216ENST00000638163 SH3GLB2Q9NR46 395 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 PGAP2Q9UHJ9 254 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 MYH8P13535 1937 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 SCN4AP35499 1836 aa11.97□□□□□ -0.49
LINC00598-216ENST00000638163 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms