RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 DLGAP5Q15398 846 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 ZSCAN23Q3MJ62 389 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 CFAP100Q494V2 611 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 TPRNQ4KMQ1 711 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 APOBEC3HQ6NTF7 200 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 TMTC3Q6ZXV5 915 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 JMYQ8N9B5 988 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 KCNG4Q8TDN1 519 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 ANP32BQ92688 251 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 CHAMP1Q96JM3 812 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 CCDC17Q96LX7 622 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 IDI2Q9BXS1 227 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 TAOK3Q9H2K8 898 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 ZNF277Q9NRM2 450 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 FAM217BQ9NTX9 383 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 TFIP11Q9UBB9 837 aaKnown RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 PLIN4Q96Q06 1357 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 COL2A1P02458 1487 aaPredicted RBP7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 FER1L6Q2WGJ9 1857 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 SCN9AQ15858 1988 aa7.28□□□□□ -1.24
CACNA1D-227ENST00000637844 SMIM22K7EJ46 135 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 MPHOSPH10O00566 681 aaKnown RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 NMT2O60551 498 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 ENTPD3O75355 529 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 YEATS4O95619 227 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 MMP1P03956 469 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 PARP1P09874 1014 aaKnown RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 CALML3P27482 149 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 KRT2P35908 639 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 ME1P48163 572 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 CEBPZQ03701 1054 aaKnown RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 EVX2Q03828 476 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 GRM4Q14833 912 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 TNIP1Q15025 636 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 MYSM1Q5VVJ2 828 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 OTUD7BQ6GQQ9 843 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 FAM173BQ6P4H8 233 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 CCDC73Q6ZRK6 1079 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 NBPF11Q86T75 865 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 FOXP4Q8IVH2 680 aaPredicted RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 CCDC82Q8N4S0 544 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 SLC44A5Q8NCS7 719 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 AGBL3Q8NEM8 1001 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 TMEM47Q9BQJ4 181 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 FOXP1Q9H334 677 aaPredicted RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 KCNQ5Q9NR82 932 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 IL17RBQ9NRM6 502 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 DDX19AQ9NUU7 478 aaKnown RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 POLR3EQ9NVU0 708 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 RTEL1Q9NZ71 1219 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 PI4KBQ9UBF8 816 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 RCOR1Q9UKL0 485 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 NOL7Q9UMY1 257 aaKnown RBP7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 CEP131Q9UPN4 1083 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 ARFGEF1Q9Y6D6 1849 aa7.27□□□□□ -1.25
CACNA1D-227ENST00000637844 SYCE3A1L190 88 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 YDJCA8MPS7 323 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 PSMD14O00487 310 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 RAD17O75943 681 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 PLEKHA8P1O95397 391 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 TTLL1O95922 423 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 VIL1P09327 827 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 SCG2P13521 617 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 U2AF2P26368 475 aaKnown RBP eCLIP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 TNNI2P48788 182 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 EIF6P56537 245 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 GABPAQ06546 454 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 TCP10Q12799 353 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 RILPL1Q5EBL4 403 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 ANO1Q5XXA6 986 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 CIAPIN1Q6FI81 312 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 RCSD1Q6JBY9 416 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 LRSAM1Q6UWE0 723 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 NOSTRINQ8IVI9 506 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 DIS3L2Q8IYB7 885 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 FAM177A1Q8N128 213 aaPredicted RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 CMTR1Q8N1G2 835 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 CCDC148Q8NFR7 591 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 CCDC12Q8WUD4 166 aaPredicted RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 UPF1Q92900 1129 aaKnown RBP eCLIP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 CEP95Q96GE4 821 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 USP28Q96RU2 1077 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 NUP62CLQ9H1M0 184 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 TDRD3Q9H7E2 651 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 GRPEL1Q9HAV7 217 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 DDX4Q9NQI0 724 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 TMEM63CQ9P1W3 806 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 SEC63Q9UGP8 760 aaKnown RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 BCS1LQ9Y276 419 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 V9GY48 417 aaPredicted RBP7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 CNTNAP5Q8WYK1 1306 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
CACNA1D-227ENST00000637844 ATRNL1Q5VV63 1379 aa7.25□□□□□ -1.25
CACNA1D-227ENST00000637844 FSD2A1L4K1 749 aa7.25□□□□□ -1.25
CACNA1D-227ENST00000637844 SPTLC2O15270 562 aa7.25□□□□□ -1.25
CACNA1D-227ENST00000637844 CTAGE5O15320 804 aa7.25□□□□□ -1.25
CACNA1D-227ENST00000637844 KINO60870 393 aaKnown RBP7.25□□□□□ -1.25
CACNA1D-227ENST00000637844 BMP15O95972 392 aa7.25□□□□□ -1.25
CACNA1D-227ENST00000637844 RPS12P25398 132 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms