RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 APBA2Q99767 749 aa14.8□□□□□ -0.04
CACNA1A-250ENST00000637809 KIAA1683Q9H0B3 1180 aa14.8□□□□□ -0.04
CACNA1A-250ENST00000637809 RABGAP1Q9Y3P9 1069 aa14.8□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L15C9J2P7 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L13C9JLJ4 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L11C9JVI0 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L18D6R9N7 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L22D6RA61 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L17D6RBQ6 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L19D6RCP7 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L20D6RJB6 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 VCAM1P19320 739 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 GUCY1A2P33402 732 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 SHMT1P34896 483 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 PLCD1P51178 756 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 USP17L24Q0WX57 530 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 MAP2K5Q13163 448 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 TMED8Q6PL24 325 aaPredicted RBP14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 LBX2Q6XYB7 198 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 CATSPERGQ6ZRH7 1159 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 ALPK3Q96L96 1907 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 FEZ1Q99689 392 aa14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 RIOK1Q9BRS2 568 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-250ENST00000637809 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 MAP3K12Q12852 859 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 RAB3GAP1Q15042 981 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 ABCB5Q2M3G0 1257 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 CERKLQ49MI3 558 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 TTC6Q86TZ1 520 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 CCAR1Q8IX12 1150 aaKnown RBP14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 FLRT1Q9NZU1 646 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 BTBD7Q9P203 1132 aa14.78□□□□□ -0.04
CACNA1A-250ENST00000637809 IGHA2P01877 340 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 PTPREP23469 700 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 USP14P54578 494 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 EVX2Q03828 476 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 GABPAQ06546 454 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 LRRC26Q2I0M4 334 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 LRIT3Q3SXY7 679 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 AACSQ86V21 672 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 EXOC6BQ9Y2D4 811 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 DDX60LQ5H9U9 1706 aaKnown RBP14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 UNC80Q8N2C7 3258 aa14.77□□□□□ -0.05
CACNA1A-250ENST00000637809 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 SLC15A5A6NIM6 579 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 HOXC6P09630 235 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 CCNA1P78396 465 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 GRB14Q14449 540 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 ERC1Q8IUD2 1116 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
CACNA1A-250ENST00000637809 A0A1W2PRG0 241 aa14.75□□□□□ -0.05
CACNA1A-250ENST00000637809 SEPT2Q15019 361 aa14.75□□□□□ -0.05
CACNA1A-250ENST00000637809 SLC17A8Q8NDX2 589 aa14.75□□□□□ -0.05
CACNA1A-250ENST00000637809 RPAP3Q9H6T3 665 aaPredicted RBP14.75□□□□□ -0.05
CACNA1A-250ENST00000637809 MYO5AQ9Y4I1 1855 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 MAGEB6P1A0A0J9YX57 407 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 TCRBV5S4A2TA0A5A2 114 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 GLRX3O76003 335 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 PDE6AP16499 860 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 MFSD14CQ5VZR4 134 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 Q7L0L9 218 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 NPLOC4Q8TAT6 608 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 RHPN1Q8TCX5 695 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 UBE2OQ9C0C9 1292 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 IL1RAPL2Q9NP60 686 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 CABP5Q9NP86 173 aa14.74□□□□□ -0.05
CACNA1A-250ENST00000637809 POLR3DP05423 398 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 KIAA1755Q5JYT7 1200 aa14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 SLC9C2Q5TAH2 1124 aa14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 WDR78Q5VTH9 848 aa14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 DEFB123Q8N688 67 aa14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 TRPV1Q8NER1 839 aa14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 PANK1Q8TE04 598 aa14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 DDX20Q9UHI6 824 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-250ENST00000637809 ZNF532Q9HCE3 1301 aa14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 CYP2D6P10635 497 aa14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 CYP2C19P33261 490 aa14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 TTF1Q15361 905 aaPredicted RBP14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 SDR42E1Q8WUS8 393 aa14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 LPAR1Q92633 364 aa14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 MOV10L1Q9BXT6 1211 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 CRNKL1Q9BZJ0 848 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 DCP1AQ9NPI6 582 aaPredicted RBP14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 MCM9Q9NXL9 1143 aa14.72□□□□□ -0.05
CACNA1A-250ENST00000637809 MSCO60682 206 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 CYBAP13498 195 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 MDM2Q00987 491 aaPredicted RBP14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 ATP2B2Q01814 1243 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 COG2Q14746 738 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 HSP90AB4PQ58FF6 505 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 SIAH1Q8IUQ4 282 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 SIRT2Q8IXJ6 389 aa14.71□□□□□ -0.05
CACNA1A-250ENST00000637809 LCORLQ8N3X6 602 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms