RNA–Protein interactions for RNA: ENST00000637637.1

C11orf53-203, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 1 (best) BASIC

Gene C11orf53, Length 1,049 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-203ENST00000637637 ANKRD23Q86SG2 305 aa18.7■□□□□ 0.58
C11orf53-203ENST00000637637 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
C11orf53-203ENST00000637637 NEDD1Q8NHV4 660 aa18.7■□□□□ 0.58
C11orf53-203ENST00000637637 BRI3BPQ8WY22 251 aa18.7■□□□□ 0.58
C11orf53-203ENST00000637637 ESR2Q92731 530 aa18.7■□□□□ 0.58
C11orf53-203ENST00000637637 KRT23Q9C075 422 aa18.7■□□□□ 0.58
C11orf53-203ENST00000637637 IL25Q9H293 177 aa18.7■□□□□ 0.58
C11orf53-203ENST00000637637 SMIM22K7EJ46 135 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 JAG1P78504 1218 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 PTH1RQ03431 593 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 CCDC178Q5BJE1 867 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
C11orf53-203ENST00000637637 CCDC84Q86UT8 332 aaPredicted RBP18.69■□□□□ 0.58
C11orf53-203ENST00000637637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.69■□□□□ 0.58
C11orf53-203ENST00000637637 OTOFQ9HC10 1997 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 SIPA1L1O43166 1804 aa18.69■□□□□ 0.58
C11orf53-203ENST00000637637 ATP2B2Q01814 1243 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 MTMR2Q13614 643 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 LSG1Q9H089 658 aaKnown RBP18.68■□□□□ 0.58
C11orf53-203ENST00000637637 KIAA1683Q9H0B3 1180 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 ZFYVE28Q9HCC9 887 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 RNF186Q9NXI6 227 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.68■□□□□ 0.58
C11orf53-203ENST00000637637 PNMA3Q9UL41 463 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 SLC45A1Q9Y2W3 748 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 RBM8AQ9Y5S9 174 aaKnown RBP18.68■□□□□ 0.58
C11orf53-203ENST00000637637 DOCK1Q14185 1865 aa18.68■□□□□ 0.58
C11orf53-203ENST00000637637 BTBD19C9JJ37 291 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 TRPA1O75762 1119 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 HSPA1AP0DMV8 641 aaKnown RBP18.67■□□□□ 0.58
C11orf53-203ENST00000637637 HSPA1BP0DMV9 641 aaKnown RBP18.67■□□□□ 0.58
C11orf53-203ENST00000637637 GUCY1A2P33402 732 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 HMGCS2P54868 508 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 NYAP2Q9P242 653 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 SYNPO2Q9UMS6 1093 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
C11orf53-203ENST00000637637 IGF2BP3O00425 579 aaKnown RBP eCLIP18.66■□□□□ 0.58
C11orf53-203ENST00000637637 EPB41L2O43491 1005 aaKnown RBP18.66■□□□□ 0.58
C11orf53-203ENST00000637637 TTLL1O95922 423 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 OSBPP22059 807 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 CTCFP49711 727 aaPredicted RBP18.66■□□□□ 0.58
C11orf53-203ENST00000637637 TAF1CQ15572 869 aaPredicted RBP18.66■□□□□ 0.58
C11orf53-203ENST00000637637 SHROOM1Q2M3G4 852 aaPredicted RBP18.66■□□□□ 0.58
C11orf53-203ENST00000637637 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 IQCA1Q86XH1 822 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 LPAR1Q92633 364 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 PARK7Q99497 189 aaKnown RBP18.66■□□□□ 0.58
C11orf53-203ENST00000637637 PTPN18Q99952 460 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 GOPCQ9HD26 462 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 TMX2Q9Y320 296 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 THSD7BQ9C0I4 1608 aa18.66■□□□□ 0.58
C11orf53-203ENST00000637637 PDHXO00330 501 aa18.65■□□□□ 0.58
C11orf53-203ENST00000637637 EEF2P13639 858 aaKnown RBP18.65■□□□□ 0.58
C11orf53-203ENST00000637637 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
C11orf53-203ENST00000637637 RALYLQ86SE5 291 aaKnown RBP18.65■□□□□ 0.58
C11orf53-203ENST00000637637 C12orf42Q96LP6 360 aa18.65■□□□□ 0.58
C11orf53-203ENST00000637637 CFHR5Q9BXR6 569 aa18.65■□□□□ 0.58
C11orf53-203ENST00000637637 TCP11L1Q9NUJ3 509 aa18.65■□□□□ 0.58
C11orf53-203ENST00000637637 MTMR4Q9NYA4 1195 aa18.65■□□□□ 0.58
C11orf53-203ENST00000637637 PLIN4Q96Q06 1357 aa18.65■□□□□ 0.58
C11orf53-203ENST00000637637 CYP21A2P08686 494 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 TBC1D10CQ8IV04 446 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 ACER1Q8TDN7 264 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 MKL1Q969V6 931 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 CEP95Q96GE4 821 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 TTC14Q96N46 770 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.64■□□□□ 0.57
C11orf53-203ENST00000637637 INCENPQ9NQS7 918 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
C11orf53-203ENST00000637637 LAMB1P07942 1786 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 IGKV6D-41A0A0C4DH26 115 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 MCCP23508 829 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 IRX3P78415 501 aaPredicted RBP18.63■□□□□ 0.57
C11orf53-203ENST00000637637 ZYXQ15942 572 aaKnown RBP18.63■□□□□ 0.57
C11orf53-203ENST00000637637 GPAT2Q6NUI2 795 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 NCOA7Q8NI08 942 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 VCPKMTQ9H867 229 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 EMILIN3Q9NT22 766 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 STX8Q9UNK0 236 aa18.63■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 RAD21O60216 631 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 KDM4AO75164 1064 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 HOXA7P31268 230 aaPredicted RBP18.62■□□□□ 0.57
C11orf53-203ENST00000637637 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 MOGSQ13724 837 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 KRT32Q14532 448 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 NECTIN1Q15223 517 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 NOM1Q5C9Z4 860 aaKnown RBP18.62■□□□□ 0.57
C11orf53-203ENST00000637637 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
C11orf53-203ENST00000637637 SMCR8Q8TEV9 937 aaPredicted RBP18.62■□□□□ 0.57
C11orf53-203ENST00000637637 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms