RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 CRKLP46109 303 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 XKR5Q6UX68 686 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 KIF1BPQ96EK5 621 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 RREB1Q92766 1687 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 CICQ96RK0 1608 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 ATP4AP20648 1035 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 ARID5AQ03989 594 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 RBL2Q08999 1139 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 TCIRG1Q13488 830 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 ARMC5Q96C12 935 aa15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 INSM2Q96T92 566 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 TRPC5Q9UL62 973 aaPredicted RBP15.42■□□□□ 0.06
CACNA1A-244ENST00000637625 CDC45O75419 566 aa15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 FGRP09769 529 aa15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 SDSP20132 328 aa15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 CCDC191Q8NCU4 936 aa15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 ZFYVE28Q9HCC9 887 aa15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 V9GY48 417 aaPredicted RBP15.41■□□□□ 0.06
CACNA1A-244ENST00000637625 H7C1W4 665 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 FOXC1Q12948 553 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 HSP90AB4PQ58FF6 505 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 IER5Q5VY09 327 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 NXPE4Q6UWF7 544 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 LMBR1LQ6UX01 489 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 TTC16Q8NEE8 873 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 FAM13BQ9NYF5 915 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 RTCBQ9Y3I0 505 aaKnown RBP15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 SBF2Q86WG5 1849 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 USP17L7P0C7H9 530 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 IL6STP40189 918 aaPredicted RBP15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 SLC27A3Q5K4L6 730 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 SNX29Q8TEQ0 813 aa15.4■□□□□ 0.06
CACNA1A-244ENST00000637625 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 RPLP1P05386 114 aaKnown RBP15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 GJA8P48165 433 aa15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 G3BP1Q13283 466 aaKnown RBP eCLIP15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 TAF1CQ15572 869 aaPredicted RBP15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 ZNF438Q7Z4V0 828 aa15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 MEIOBQ8N635 442 aa15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 CHRDQ9H2X0 955 aa15.39■□□□□ 0.05
CACNA1A-244ENST00000637625 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 SASH1O94885 1247 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 FOXO4P98177 505 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 RABL6Q3YEC7 729 aaPredicted RBP15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 GNASQ5JWF2 1037 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 ERMP1Q7Z2K6 904 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 LINC00116Q8NCU8 138 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 TBC1D32Q96NH3 1257 aa15.38■□□□□ 0.05
CACNA1A-244ENST00000637625 RFX5P48382 616 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 ZNF697Q5TEC3 545 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 ZDHHC3Q9NYG2 299 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 COL15A1P39059 1388 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 GPC1P35052 558 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 RNF144AP50876 292 aaPredicted RBP15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 SMIM5Q71RC9 77 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 BTLAQ7Z6A9 289 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 NOP9Q86U38 636 aaKnown RBP15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 AACSQ86V21 672 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 ERC1Q8IUD2 1116 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 C22orf23Q9BZE7 217 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 ELP3Q9H9T3 547 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 FAM8A1Q9UBU6 413 aa15.37■□□□□ 0.05
CACNA1A-244ENST00000637625 PDE12Q6L8Q7 609 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-244ENST00000637625 CLASRPQ8N2M8 674 aaKnown RBP15.36■□□□□ 0.05
CACNA1A-244ENST00000637625 ZNF831Q5JPB2 1677 aa15.36■□□□□ 0.05
CACNA1A-244ENST00000637625 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
CACNA1A-244ENST00000637625 BCORQ6W2J9 1755 aa15.36■□□□□ 0.05
CACNA1A-244ENST00000637625 FAM177BA6PVY3 158 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 PAK2Q13177 524 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 NLRP10Q86W26 655 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 CMTR1Q8N1G2 835 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 SNIP1Q8TAD8 396 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 TLR7Q9NYK1 1049 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 STAP2Q9UGK3 403 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 EP400Q96L91 3159 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 IFIT2P09913 472 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 CTSOP43234 321 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 BCO2Q9BYV7 579 aa15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 CCDC8Q9H0W5 538 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-244ENST00000637625 ATF4P18848 351 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-244ENST00000637625 ARSDP51689 593 aa15.34■□□□□ 0.05
CACNA1A-244ENST00000637625 PI4K2BQ8TCG2 481 aa15.34■□□□□ 0.05
CACNA1A-244ENST00000637625 CNTN3Q9P232 1028 aa15.34■□□□□ 0.05
CACNA1A-244ENST00000637625 MYH3P11055 1940 aa15.34■□□□□ 0.05
CACNA1A-244ENST00000637625 LY75O60449 1722 aa15.33■□□□□ 0.05
CACNA1A-244ENST00000637625 EREGO14944 169 aa15.33■□□□□ 0.05
CACNA1A-244ENST00000637625 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms