RNA–Protein interactions for RNA: ENST00000637624.1

PXN-222, Transcript of paxillin, human

TSL 2

Gene PXN, Length 4,132 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PXN-222	ENST00000637624	NAPB	Q9H115	298 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	ZHX3	Q9H4I2	956 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	PEAK1	Q9H792	1746 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624		A0A1W2PQ27	194 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624		A0A1W2PQ64	194 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624		A0A1W2PQD8	194 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	PFKFB2	O60825	505 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	PRPF4B	Q13523	1007 aa	Known RBP	13.63	□□□□□ -0.23
PXN-222	ENST00000637624	MTF1	Q14872	753 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	CDK5RAP3	Q96JB5	506 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	POLD4	Q9HCU8	107 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	PAG1	Q9NWQ8	432 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	SERTAD1	Q9UHV2	236 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	CORO7	P57737	925 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	PPP1R7	Q15435	360 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	FAM182B	Q5T319	152 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	CNPY4	Q8N129	248 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.63	□□□□□ -0.23
PXN-222	ENST00000637624	GJB4	Q9NTQ9	266 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	RTEL1	Q9NZ71	1219 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	PHLPP1	O60346	1717 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	CAMTA1	Q9Y6Y1	1673 aa		13.63	□□□□□ -0.23
PXN-222	ENST00000637624	CYP21A2	P08686	494 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	BIRC2	Q13490	618 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	SAMSN1	Q9NSI8	373 aa	Known RBP	13.62	□□□□□ -0.23
PXN-222	ENST00000637624	TRPC5	Q9UL62	973 aa	Predicted RBP	13.62	□□□□□ -0.23
PXN-222	ENST00000637624	TAF5L	O75529	589 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	TOB2	Q14106	344 aa	Predicted RBP	13.62	□□□□□ -0.23
PXN-222	ENST00000637624	KSR2	Q6VAB6	950 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	MMRN2	Q9H8L6	949 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	PRAMEF22	A3QJZ6	481 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	MINDY4B	A8MYZ0	360 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	RBL2	Q08999	1139 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	SNCB	Q16143	134 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	KRT40	Q6A162	431 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	NACAP1	Q9BZK3	213 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	COL5A2	P05997	1499 aa	Predicted RBP	13.62	□□□□□ -0.23
PXN-222	ENST00000637624	MPHOSPH10	O00566	681 aa	Known RBP	13.62	□□□□□ -0.23
PXN-222	ENST00000637624	CHUK	O15111	745 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	TIMM10	P62072	90 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.62	□□□□□ -0.23
PXN-222	ENST00000637624	KIF6	Q6ZMV9	814 aa		13.62	□□□□□ -0.23
PXN-222	ENST00000637624	ANKRD18B	A2A2Z9	1011 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	ALDH1L1	O75891	902 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	CLTA	P09496	248 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	GGCX	P38435	758 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	ARID5A	Q03989	594 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	LINS1	Q8NG48	757 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	UBLCP1	Q8WVY7	318 aa	Predicted RBP	13.61	□□□□□ -0.23
PXN-222	ENST00000637624	MYL10	Q9BUA6	226 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	SLC52A2	Q9HAB3	445 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	TLR7	Q9NYK1	1049 aa	Known RBP	13.61	□□□□□ -0.23
PXN-222	ENST00000637624		A6NNZ2	444 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	NEFH	P12036	1026 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	MAP3K9	P80192	1104 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	TUBB8	Q3ZCM7	444 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	EEF2KMT	Q96G04	330 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.61	□□□□□ -0.23
PXN-222	ENST00000637624	PSD3	Q9NYI0	1048 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	TRIM75P	A6NK02	468 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624		E7EWF7	191 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	ZPR1	O75312	459 aa		13.61	□□□□□ -0.23
PXN-222	ENST00000637624	TRIM6	Q9C030	488 aa	Predicted RBP	13.61	□□□□□ -0.23
PXN-222	ENST00000637624	RBM28	Q9NW13	759 aa	Known RBP	13.61	□□□□□ -0.23
PXN-222	ENST00000637624	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.6	□□□□□ -0.23
PXN-222	ENST00000637624	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.6	□□□□□ -0.23
PXN-222	ENST00000637624	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
PXN-222	ENST00000637624	SPATA31A1	Q5TZJ5	1347 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	LMBR1L	Q6UX01	489 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	CCDC50	Q8IVM0	306 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	GRAMD1C	Q8IYS0	662 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	CABP5	Q9NP86	173 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	SEPT11	Q9NVA2	429 aa	Known RBP	13.6	□□□□□ -0.23
PXN-222	ENST00000637624	KIF5B	P33176	963 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.6	□□□□□ -0.23
PXN-222	ENST00000637624	SHPRH	Q149N8	1683 aa		13.6	□□□□□ -0.23
PXN-222	ENST00000637624	VWA3A	A6NCI4	1184 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	VIM	P08670	466 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	PDIA3	P30101	505 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	ADD1	P35611	737 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	GOLGA8K	D6RF30	607 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	UBA7	P41226	1012 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	SF3B2	Q13435	895 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	IQCA1	Q86XH1	822 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	SRGAP2	O75044	1071 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	ERCC3	P19447	782 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	HNRNPH1	P31943	449 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	TBC1D8B	Q0IIM8	1120 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	DIS3L2	Q8IYB7	885 aa	Known RBP	13.59	□□□□□ -0.23
PXN-222	ENST00000637624	CCDC24	Q8N4L8	307 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	LTN1	O94822	1766 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	MEGF6	O75095	1541 aa		13.59	□□□□□ -0.23
PXN-222	ENST00000637624	KIF1C	O43896	1103 aa	Known RBP	13.58	□□□□□ -0.23
PXN-222	ENST00000637624	VPS72	Q15906	364 aa		13.58	□□□□□ -0.23
PXN-222	ENST00000637624	ZNF790	Q6PG37	636 aa		13.58	□□□□□ -0.23
PXN-222	ENST00000637624	TCP11	Q8WWU5	503 aa		13.58	□□□□□ -0.23
PXN-222	ENST00000637624	SUCLG2	Q96I99	432 aa		13.58	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms