RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 USP17L15C9J2P7 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L13C9JLJ4 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L11C9JVI0 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L18D6R9N7 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L22D6RA61 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L17D6RBQ6 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L19D6RCP7 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L20D6RJB6 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 CAPN2P17655 700 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 ADD2P35612 726 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 ERVK-9P63128 1117 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 ERVK-24P63145 666 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 GABPAQ06546 454 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 USP17L24Q0WX57 530 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 UBE2Q1Q7Z7E8 422 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 SOCS4Q8WXH5 440 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 MYH7P12883 1935 aa27.53■■■□□ 2
CHRNA7-229ENST00000637552 H0YGN5 161 aa27.52■■■□□ 2
CHRNA7-229ENST00000637552 MPHOSPH10O00566 681 aaKnown RBP27.52■■■□□ 2
CHRNA7-229ENST00000637552 MBD4O95243 580 aa27.52■■■□□ 2
CHRNA7-229ENST00000637552 MAPK4P31152 587 aa27.52■■■□□ 2
CHRNA7-229ENST00000637552 ACER1Q8TDN7 264 aa27.52■■■□□ 2
CHRNA7-229ENST00000637552 NUDT12Q9BQG2 462 aa27.52■■■□□ 2
CHRNA7-229ENST00000637552 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.52■■■□□ 2
CHRNA7-229ENST00000637552 CWC22Q9HCG8 908 aaKnown RBP27.52■■■□□ 2
CHRNA7-229ENST00000637552 PLXNB2O15031 1838 aa27.52■■■□□ 2
CHRNA7-229ENST00000637552 SMARCA5O60264 1052 aaPredicted RBP27.51■■□□□ 1.99
CHRNA7-229ENST00000637552 VCAM1P19320 739 aa27.51■■□□□ 1.99
CHRNA7-229ENST00000637552 CYP2B6P20813 491 aa27.51■■□□□ 1.99
CHRNA7-229ENST00000637552 SEPT2Q15019 361 aa27.51■■□□□ 1.99
CHRNA7-229ENST00000637552 MYH8P13535 1937 aa27.51■■□□□ 1.99
CHRNA7-229ENST00000637552 EVX2Q03828 476 aa27.5■■□□□ 1.99
CHRNA7-229ENST00000637552 ATP8A2Q9NTI2 1148 aa27.5■■□□□ 1.99
CHRNA7-229ENST00000637552 CYP2D6P10635 497 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 GUCY1A2P33402 732 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 Q3C1V9 767 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 SLFNL1Q499Z3 407 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 AMOTL1Q8IY63 956 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 DDRGK1Q96HY6 314 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 PORCNQ9H237 461 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 SWAP70Q9UH65 585 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 RABGAP1Q9Y3P9 1069 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 BAZ2AQ9UIF9 1905 aaKnown RBP27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 TRIOBPQ9H2D6 2365 aa27.49■■□□□ 1.99
CHRNA7-229ENST00000637552 PRKAB2O43741 272 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 CCNA1P78396 465 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 UBE3CQ15386 1083 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 ZSCAN25Q6NSZ9 544 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 CATSPERGQ6ZRH7 1159 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 GPR142Q7Z601 462 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 SLC44A5Q8NCS7 719 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 TRIB2Q92519 343 aa27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 HMX1Q9NP08 348 aaPredicted RBP27.48■■□□□ 1.99
CHRNA7-229ENST00000637552 RPTORQ8N122 1335 aa27.47■■□□□ 1.99
CHRNA7-229ENST00000637552 TRIM32Q13049 653 aa27.47■■□□□ 1.99
CHRNA7-229ENST00000637552 PLEKHH3Q7Z736 793 aa27.47■■□□□ 1.99
CHRNA7-229ENST00000637552 CRISPLD2Q9H0B8 497 aa27.47■■□□□ 1.99
CHRNA7-229ENST00000637552 RPAP3Q9H6T3 665 aaPredicted RBP27.47■■□□□ 1.99
CHRNA7-229ENST00000637552 COLQQ9Y215 455 aaPredicted RBP27.47■■□□□ 1.99
CHRNA7-229ENST00000637552 XRCC5P13010 732 aaKnown RBP27.46■■□□□ 1.99
CHRNA7-229ENST00000637552 RGS2P41220 211 aa27.46■■□□□ 1.99
CHRNA7-229ENST00000637552 TMEM179Q6ZVK1 233 aa27.46■■□□□ 1.99
CHRNA7-229ENST00000637552 TRMT44Q8IYL2 757 aaKnown RBP27.46■■□□□ 1.99
CHRNA7-229ENST00000637552 ECHDC1Q9NTX5 307 aa27.46■■□□□ 1.99
CHRNA7-229ENST00000637552 NR2E3Q9Y5X4 410 aa27.46■■□□□ 1.99
CHRNA7-229ENST00000637552 GLRX3O76003 335 aaKnown RBP27.45■■□□□ 1.98
CHRNA7-229ENST00000637552 ZKSCAN1P17029 563 aaPredicted RBP27.45■■□□□ 1.98
CHRNA7-229ENST00000637552 WDR78Q5VTH9 848 aa27.45■■□□□ 1.98
CHRNA7-229ENST00000637552 POTEEQ6S8J3 1075 aa27.45■■□□□ 1.98
CHRNA7-229ENST00000637552 DYNLL2Q96FJ2 89 aa27.45■■□□□ 1.98
CHRNA7-229ENST00000637552 GPATCH3Q96I76 525 aa27.45■■□□□ 1.98
CHRNA7-229ENST00000637552 CHGBP05060 677 aa27.44■■□□□ 1.98
CHRNA7-229ENST00000637552 PRKAR2AP13861 404 aaKnown RBP27.44■■□□□ 1.98
CHRNA7-229ENST00000637552 SLC4A4Q9Y6R1 1079 aa27.44■■□□□ 1.98
CHRNA7-229ENST00000637552 CNMDO75829 334 aa27.43■■□□□ 1.98
CHRNA7-229ENST00000637552 LBX2Q6XYB7 198 aa27.43■■□□□ 1.98
CHRNA7-229ENST00000637552 APBA2Q99767 749 aa27.43■■□□□ 1.98
CHRNA7-229ENST00000637552 A0A1W2PRG0 241 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 SPDYE16A6NNV3 312 aaPredicted RBP27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 MORN1Q5T089 497 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 ANKLE1Q8NAG6 615 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 USP6NLQ92738 828 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 PAWRQ96IZ0 340 aaKnown RBP27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 TANGO6Q9C0B7 1094 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 DCTPP1Q9H773 170 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 ARHGEF10LQ9HCE6 1279 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 PCDH10Q9P2E7 1040 aa27.42■■□□□ 1.98
CHRNA7-229ENST00000637552 CYP2D7A0A087X1C5 515 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 USP17L12C9JPN9 530 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 USP17L21D6R901 530 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 EVI5O60447 810 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 AKR1B1P15121 316 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 ICA1Q05084 483 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 MAP3K21Q5TCX8 1036 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 C12orf60Q5U649 245 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 CHRDL2Q6WN34 429 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 NECAB2Q7Z6G3 386 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 CCDC17Q96LX7 622 aa27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 PUS7LQ9H0K6 701 aaKnown RBP27.41■■□□□ 1.98
CHRNA7-229ENST00000637552 SH2D4AQ9H788 454 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms