RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SARM1Q6SZW1 724 aa17.73■□□□□ 0.43
CLN5-218ENST00000637397 CCDC65Q8IXS2 484 aa17.73■□□□□ 0.43
CLN5-218ENST00000637397 SLC35F6Q8N357 371 aa17.73■□□□□ 0.43
CLN5-218ENST00000637397 SDR42E1Q8WUS8 393 aa17.73■□□□□ 0.43
CLN5-218ENST00000637397 TNKSO95271 1327 aa17.73■□□□□ 0.43
CLN5-218ENST00000637397 KLHL7Q8IXQ5 586 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 SLFNL1Q499Z3 407 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 NBPF14Q5TI25 921 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 PI16Q6UXB8 463 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 EHMT1Q9H9B1 1298 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 CCDC174Q6PII3 467 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 RGS22Q8NE09 1264 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 NLRC4Q9NPP4 1024 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 EPN1Q9Y6I3 576 aaPredicted RBP17.72■□□□□ 0.43
CLN5-218ENST00000637397 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 DDIT3P35638 169 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 RRAGAQ7L523 313 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 HS2ST1Q7LGA3 356 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 PLA2G4DQ86XP0 818 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 SMYD4Q8IYR2 804 aaPredicted RBP17.72■□□□□ 0.43
CLN5-218ENST00000637397 SYMPKQ92797 1274 aaKnown RBP17.72■□□□□ 0.43
CLN5-218ENST00000637397 CSRNP2Q9H175 543 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 LRWD1Q9UFC0 647 aa17.72■□□□□ 0.43
CLN5-218ENST00000637397 DDB1Q16531 1140 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 RPGRIP1Q96KN7 1286 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 HAUS4Q9H6D7 363 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 DDX41Q9UJV9 622 aaKnown RBP17.71■□□□□ 0.43
CLN5-218ENST00000637397 GBP6Q6ZN66 633 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 MROH5Q6ZUA9 1318 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 USP27XA6NNY8 438 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 USP17L12C9JPN9 530 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 USP17L21D6R901 530 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 ARID4AP29374 1257 aaPredicted RBP17.71■□□□□ 0.43
CLN5-218ENST00000637397 CCDC84Q86UT8 332 aaPredicted RBP17.71■□□□□ 0.43
CLN5-218ENST00000637397 CABP7Q86V35 215 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 PTGDRQ13258 359 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 NONOQ15233 471 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLN5-218ENST00000637397 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 TRIM31Q9BZY9 425 aa17.71■□□□□ 0.43
CLN5-218ENST00000637397 NEO1Q92859 1461 aa17.71■□□□□ 0.42
CLN5-218ENST00000637397 ENC1O14682 589 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 TERF2Q15554 542 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 TPTE2Q6XPS3 522 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 ZNF804AQ7Z570 1209 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 PARD6BQ9BYG5 372 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 SAMSN1Q9NSI8 373 aaKnown RBP17.7■□□□□ 0.42
CLN5-218ENST00000637397 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 HIBADHP31937 336 aaKnown RBP17.7■□□□□ 0.42
CLN5-218ENST00000637397 PHKA1P46020 1223 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 CTSWP56202 376 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 CFAP221Q4G0U5 840 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 VSTM4Q8IW00 320 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 CCDC26Q8TAB7 109 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLN5-218ENST00000637397 GPR108Q9NPR9 543 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 CEP104O60308 925 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 PNMA6AP0CW24 399 aaPredicted RBP17.7■□□□□ 0.42
CLN5-218ENST00000637397 FAM13AO94988 1023 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 RBL2Q08999 1139 aa17.7■□□□□ 0.42
CLN5-218ENST00000637397 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
CLN5-218ENST00000637397 SNX29Q8TEQ0 813 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 GOLPH3LQ9H4A5 285 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 ATP8B1O43520 1251 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 ERCC5P28715 1186 aaPredicted RBP17.69■□□□□ 0.42
CLN5-218ENST00000637397 TFAP4Q01664 338 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 PAK2Q13177 524 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 GOLGA5Q8TBA6 731 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 UIMC1Q96RL1 719 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 STMN4Q9H169 189 aaPredicted RBP17.69■□□□□ 0.42
CLN5-218ENST00000637397 TBC1D7Q9P0N9 293 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 NR5A1Q13285 461 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 EPHA10Q5JZY3 1008 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 TFCP2L1Q9NZI6 479 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 SAMD15Q9P1V8 674 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 MTRF1LQ9UGC7 380 aaKnown RBP17.69■□□□□ 0.42
CLN5-218ENST00000637397 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLN5-218ENST00000637397 MED23Q9ULK4 1368 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 DNM2P50570 870 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
CLN5-218ENST00000637397 UBE3CQ15386 1083 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 POTEDQ86YR6 584 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 KCNF1Q9H3M0 494 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 MAN1B1Q9UKM7 699 aa17.69■□□□□ 0.42
CLN5-218ENST00000637397 H7C1D1 291 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 RAD51AP2Q09MP3 1159 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 HERC4Q5GLZ8 1057 aaPredicted RBP17.68■□□□□ 0.42
CLN5-218ENST00000637397 CCDC77Q9BR77 488 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 MLH3Q9UHC1 1453 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 SOWAHDA6NJG2 315 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 A6NNZ2 444 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 CETN3O15182 167 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
CLN5-218ENST00000637397 TUBB8Q3ZCM7 444 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
CLN5-218ENST00000637397 ZSCAN10Q96SZ4 725 aaPredicted RBP17.68■□□□□ 0.42
CLN5-218ENST00000637397 ANKRD2Q9GZV1 360 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 227.2 ms