RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 TRPM4Q8TD43 1214 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 IGKV6D-41A0A0C4DH26 115 aa24.61■■□□□ 1.53
CLN8-213ENST00000637156 STX6O43752 255 aa24.61■■□□□ 1.53
CLN8-213ENST00000637156 HMGN5P82970 282 aaKnown RBP24.61■■□□□ 1.53
CLN8-213ENST00000637156 CERKLQ49MI3 558 aaPredicted RBP24.61■■□□□ 1.53
CLN8-213ENST00000637156 CCDC17Q96LX7 622 aa24.61■■□□□ 1.53
CLN8-213ENST00000637156 TMEM47Q9BQJ4 181 aa24.61■■□□□ 1.53
CLN8-213ENST00000637156 MTMR4Q9NYA4 1195 aa24.61■■□□□ 1.53
CLN8-213ENST00000637156 KAT14Q9H8E8 782 aa24.6■■□□□ 1.53
CLN8-213ENST00000637156 RRP1BQ14684 758 aaKnown RBP24.6■■□□□ 1.53
CLN8-213ENST00000637156 RTN1Q16799 776 aa24.6■■□□□ 1.53
CLN8-213ENST00000637156 TRIM34Q9BYJ4 488 aa24.6■■□□□ 1.53
CLN8-213ENST00000637156 HERC5Q9UII4 1024 aaKnown RBP24.6■■□□□ 1.53
CLN8-213ENST00000637156 SIPA1L1O43166 1804 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 PLIN4Q96Q06 1357 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 DDAH1O94760 285 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 TNNI2P48788 182 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 PPP2R5BQ15173 497 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 SHROOM1Q2M3G4 852 aaPredicted RBP24.59■■□□□ 1.53
CLN8-213ENST00000637156 FOXD4L5Q5VV16 416 aaPredicted RBP24.59■■□□□ 1.53
CLN8-213ENST00000637156 PNMA1Q8ND90 353 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 FOXD4L4Q8WXT5 416 aaPredicted RBP24.59■■□□□ 1.53
CLN8-213ENST00000637156 TEPSINQ96N21 525 aa24.59■■□□□ 1.53
CLN8-213ENST00000637156 CALM1P0DP23 149 aa24.58■■□□□ 1.53
CLN8-213ENST00000637156 CALM2P0DP24 149 aa24.58■■□□□ 1.53
CLN8-213ENST00000637156 CALM3P0DP25 149 aa24.58■■□□□ 1.53
CLN8-213ENST00000637156 CMTR1Q8N1G2 835 aaKnown RBP24.58■■□□□ 1.53
CLN8-213ENST00000637156 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.58■■□□□ 1.533e-6■■■■■ 29.3
CLN8-213ENST00000637156 CCDC196A0A1B0GTZ2 297 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 MPHOSPH10O00566 681 aaKnown RBP24.58■■□□□ 1.52
CLN8-213ENST00000637156 TBC1D12O60347 775 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 MAP3K10Q02779 954 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 TNFAIP1Q13829 316 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 DPY19L2Q6NUT2 758 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 MIGA2Q7L4E1 593 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 FAM184AQ8NB25 1140 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 PHKBQ93100 1093 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 DEFB129Q9H1M3 183 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 MTMR6Q9Y217 621 aa24.58■■□□□ 1.52
CLN8-213ENST00000637156 IFNAR1P17181 557 aa24.57■■□□□ 1.52
CLN8-213ENST00000637156 PDCP20941 246 aa24.57■■□□□ 1.52
CLN8-213ENST00000637156 JAG1P78504 1218 aa24.57■■□□□ 1.52
CLN8-213ENST00000637156 ANGEL2Q5VTE6 544 aaKnown RBP24.57■■□□□ 1.52
CLN8-213ENST00000637156 CLEC10AQ8IUN9 316 aa24.57■■□□□ 1.52
CLN8-213ENST00000637156 ORC3Q9UBD5 711 aaPredicted RBP24.57■■□□□ 1.52
CLN8-213ENST00000637156 WDR33Q9C0J8 1336 aaKnown RBP24.56■■□□□ 1.52
CLN8-213ENST00000637156 CPLX2Q6PUV4 134 aaKnown RBP24.56■■□□□ 1.52
CLN8-213ENST00000637156 NBPF11Q86T75 865 aa24.56■■□□□ 1.52
CLN8-213ENST00000637156 CCDC82Q8N4S0 544 aa24.56■■□□□ 1.52
CLN8-213ENST00000637156 CDKL5O76039 1030 aa24.55■■□□□ 1.52
CLN8-213ENST00000637156 ZSCAN22P10073 491 aaPredicted RBP24.55■■□□□ 1.52
CLN8-213ENST00000637156 TOP1P11387 765 aaKnown RBP24.55■■□□□ 1.52
CLN8-213ENST00000637156 PDIA4P13667 645 aaKnown RBP24.55■■□□□ 1.52
CLN8-213ENST00000637156 GUCY1A2P33402 732 aa24.55■■□□□ 1.52
CLN8-213ENST00000637156 NFKBIBQ15653 356 aa24.55■■□□□ 1.52
CLN8-213ENST00000637156 CLIP2Q9UDT6 1046 aa24.55■■□□□ 1.52
CLN8-213ENST00000637156 UBE2Q2LH0YL09 131 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 GDF11O95390 407 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 TTLL1O95922 423 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 FUT2Q10981 343 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 ABCB5Q2M3G0 1257 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 SIAH1Q8IUQ4 282 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 MAP3K14Q99558 947 aa24.54■■□□□ 1.52
CLN8-213ENST00000637156 ADARB2Q9NS39 739 aaKnown RBP24.54■■□□□ 1.52
CLN8-213ENST00000637156 LMOD1P29536 600 aaPredicted RBP24.53■■□□□ 1.52
CLN8-213ENST00000637156 RBM28Q9NW13 759 aaKnown RBP24.53■■□□□ 1.52
CLN8-213ENST00000637156 VPS37CA5D8V6 355 aaPredicted RBP24.53■■□□□ 1.52
CLN8-213ENST00000637156 PLEKHA8P1O95397 391 aa24.53■■□□□ 1.52
CLN8-213ENST00000637156 FMNL1O95466 1100 aaPredicted RBP24.53■■□□□ 1.52
CLN8-213ENST00000637156 SEPT2Q15019 361 aa24.53■■□□□ 1.52
CLN8-213ENST00000637156 CLEC17AQ6ZS10 378 aa24.53■■□□□ 1.52
CLN8-213ENST00000637156 CTCFLQ8NI51 663 aaPredicted RBP24.53■■□□□ 1.52
CLN8-213ENST00000637156 KANSL2Q9H9L4 492 aa24.53■■□□□ 1.52
CLN8-213ENST00000637156 GLTPD2A6NH11 291 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 SSRP1Q08945 709 aaKnown RBP24.52■■□□□ 1.52
CLN8-213ENST00000637156 TMEM179Q6ZVK1 233 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 CDC37L1Q7L3B6 337 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 SRBD1Q8N5C6 995 aaKnown RBP24.52■■□□□ 1.52
CLN8-213ENST00000637156 L3MBTL3Q96JM7 780 aaPredicted RBP24.52■■□□□ 1.52
CLN8-213ENST00000637156 SLC26A6Q9BXS9 759 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 MAD2L2Q9UI95 211 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 MTMR7Q9Y216 660 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 KIF3AQ9Y496 699 aa24.52■■□□□ 1.52
CLN8-213ENST00000637156 GH2P01242 217 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 TMTC3Q6ZXV5 915 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 STAG2Q8N3U4 1231 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 MKL1Q969V6 931 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 AIFM3Q96NN9 605 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 GGA3Q9NZ52 723 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 GRM4Q14833 912 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 NBPF12Q5TAG4 269 aaPredicted RBP24.51■■□□□ 1.51
CLN8-213ENST00000637156 RASGRP2Q7LDG7 609 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 CHAMP1Q96JM3 812 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 GJB4Q9NTQ9 266 aa24.51■■□□□ 1.51
CLN8-213ENST00000637156 F13A1P00488 732 aa24.5■■□□□ 1.51
CLN8-213ENST00000637156 EEF2P13639 858 aaKnown RBP24.5■■□□□ 1.51
CLN8-213ENST00000637156 FOSBP53539 338 aa24.5■■□□□ 1.51
CLN8-213ENST00000637156 PRAMEF18Q5VWM3 479 aa24.5■■□□□ 1.51
CLN8-213ENST00000637156 APOBEC3FQ8IUX4 373 aaKnown RBP24.5■■□□□ 1.51
CLN8-213ENST00000637156 LRRC47Q8N1G4 583 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms