RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 A0A087WWV3 80 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 NR5A1Q13285 461 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 PNOCQ13519 176 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 CT47A1Q5JQC4 288 aaPredicted RBP13.88□□□□□ -0.19
CLN8-212ENST00000637083 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
CLN8-212ENST00000637083 PYM1Q9BRP8 204 aaKnown RBP13.88□□□□□ -0.19
CLN8-212ENST00000637083 ZNF287Q9HBT7 754 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 PAXBP1Q9Y5B6 917 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 PCDHB6Q9Y5E3 794 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 KIAA1551Q9HCM1 1747 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 SMIM22K7EJ46 135 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 SKILP12757 684 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 USP5P45974 858 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 GNAQP50148 359 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 NFIXQ14938 502 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 NCAPHQ15003 741 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 POSTNQ15063 836 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 DGKHQ86XP1 1220 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 MLKLQ8NB16 471 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 SMARCE1Q969G3 411 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 XPO4Q9C0E2 1151 aaKnown RBP13.88□□□□□ -0.19
CLN8-212ENST00000637083 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
CLN8-212ENST00000637083 KCND1Q9NSA2 647 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 VPS54Q9P1Q0 977 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 PCDHA5Q9Y5H7 936 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 LAMB1P07942 1786 aa13.88□□□□□ -0.19
CLN8-212ENST00000637083 IRS2Q9Y4H2 1338 aa13.87□□□□□ -0.19
CLN8-212ENST00000637083 KIF2AO00139 706 aaPredicted RBP13.87□□□□□ -0.19
CLN8-212ENST00000637083 PPP4CP60510 307 aa13.87□□□□□ -0.19
CLN8-212ENST00000637083 FANCCQ00597 558 aa13.87□□□□□ -0.19
CLN8-212ENST00000637083 NT5DC1Q5TFE4 455 aa13.87□□□□□ -0.19
CLN8-212ENST00000637083 RPGRQ92834 1020 aaKnown RBP13.87□□□□□ -0.19
CLN8-212ENST00000637083 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
CLN8-212ENST00000637083 POLR2DO15514 142 aaKnown RBP13.86□□□□□ -0.19
CLN8-212ENST00000637083 PLEKHA8P1O95397 391 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 CALML3P27482 149 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 ST5P78524 1137 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
CLN8-212ENST00000637083 C12orf60Q5U649 245 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 OXER1Q8TDS5 423 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 TRPC5Q9UL62 973 aaPredicted RBP13.86□□□□□ -0.19
CLN8-212ENST00000637083 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 BAZ2AQ9UIF9 1905 aaKnown RBP13.86□□□□□ -0.19
CLN8-212ENST00000637083 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 SERPINC1P01008 464 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 SCG2P13521 617 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 TNNT1P13805 278 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 SFPQP23246 707 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLN8-212ENST00000637083 ATP2B4P23634 1241 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 KCNJ6P48051 423 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
CLN8-212ENST00000637083 ANKS1AQ92625 1134 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 SH3GLB2Q9NR46 395 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 MYH6P13533 1939 aa13.86□□□□□ -0.19
CLN8-212ENST00000637083 MYH2Q9UKX2 1941 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 CCP110O43303 1012 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 TUBB4AP04350 444 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 ATP2B1P20020 1258 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
CLN8-212ENST00000637083 PFKFB3Q16875 520 aaPredicted RBP13.85□□□□□ -0.19
CLN8-212ENST00000637083 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 RBM17Q96I25 401 aaKnown RBP13.85□□□□□ -0.19
CLN8-212ENST00000637083 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 TCP11L1Q9NUJ3 509 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 SERTAD1Q9UHV2 236 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 ROBO3Q96MS0 1386 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
CLN8-212ENST00000637083 PLCG2P16885 1265 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 UBASH3AP57075 661 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 NLRP5P59047 1200 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 FAM47AQ5JRC9 791 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 ISM2Q6H9L7 571 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 ZNF444Q8N0Y2 327 aaPredicted RBP13.85□□□□□ -0.19
CLN8-212ENST00000637083 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 CSRNP2Q9H175 543 aa13.85□□□□□ -0.19
CLN8-212ENST00000637083 SARSP49591 514 aaKnown RBP13.84□□□□□ -0.19
CLN8-212ENST00000637083 CCZ1BP86790 482 aa13.84□□□□□ -0.19
CLN8-212ENST00000637083 CCZ1P86791 482 aaPredicted RBP13.84□□□□□ -0.19
CLN8-212ENST00000637083 TFAP4Q01664 338 aa13.84□□□□□ -0.19
CLN8-212ENST00000637083 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
CLN8-212ENST00000637083 TTC38Q5R3I4 469 aa13.84□□□□□ -0.19
CLN8-212ENST00000637083 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
CLN8-212ENST00000637083 SRBD1Q8N5C6 995 aaKnown RBP13.84□□□□□ -0.19
CLN8-212ENST00000637083 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
CLN8-212ENST00000637083 LZTS2Q9BRK4 669 aa13.84□□□□□ -0.19
CLN8-212ENST00000637083 BBOX1O75936 387 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 ERCC5P28715 1186 aaPredicted RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 MORC3Q14149 939 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 SPECC1Q5M775 1068 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 TMC4Q7Z404 712 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 ENOX1Q8TC92 643 aaKnown RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 QTRT2Q9H974 415 aaKnown RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 MKRN1Q9UHC7 482 aaKnown RBP13.83□□□□□ -0.2
CLN8-212ENST00000637083 MAN1B1Q9UKM7 699 aa13.83□□□□□ -0.2
CLN8-212ENST00000637083 JAG2Q9Y219 1238 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms