RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CWC25Q9NXE8 425 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 GYPCP04921 128 aa17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 PSEN1P49768 467 aa17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 SMARCC1Q92922 1105 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-235ENST00000637004 BCL9LQ86UU0 1499 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 PRPF6O94906 941 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 SYF2O95926 243 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 CYB5R4Q7L1T6 521 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 NCAPGQ9BPX3 1015 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 SLC26A6Q9BXS9 759 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 DDX60Q8IY21 1712 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 ABCC12Q96J65 1359 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 BTBD18B2RXH4 712 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 TFRCP02786 760 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 MMP1P03956 469 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 ARHGAP25P42331 645 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 TOB1P50616 345 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 FXR1P51114 621 aaKnown RBP eCLIP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 USP14P54578 494 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 AKAP17AQ02040 695 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 GRIN1Q05586 938 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 KLHL10Q6JEL2 608 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 MMS22LQ6ZRQ5 1243 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 CNPY4Q8N129 248 aa17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-235ENST00000637004 TRIM14Q14142 442 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 SGMS1Q86VZ5 419 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 DIS3L2Q8IYB7 885 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 MYCBPQ99417 103 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 CUL4BQ13620 913 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 RAPGEF4Q8WZA2 1011 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 ZNF594Q96JF6 807 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 RPGRIP1Q96KN7 1286 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 DRC1Q96MC2 740 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 ABHD10Q9NUJ1 306 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 HPCAL4Q9UM19 191 aa17.59■□□□□ 0.41
CACNA1A-235ENST00000637004 TARSL2A2RTX5 802 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 STIM1Q13586 685 aa17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 NCAPH2Q6IBW4 605 aa17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 TBC1D10CQ8IV04 446 aa17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 COG1Q8WTW3 980 aa17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 XAGE2Q96GT9 111 aa17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 NBPF3Q9H094 633 aa17.58■□□□□ 0.41
CACNA1A-235ENST00000637004 STX17P56962 302 aa17.58■□□□□ 0.4
CACNA1A-235ENST00000637004 HSP90AB3PQ58FF7 597 aa17.58■□□□□ 0.4
CACNA1A-235ENST00000637004 FAM217BQ9NTX9 383 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-235ENST00000637004 ANKRD65E5RJM6 399 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 ERVK-24P63145 666 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 IGDCC4Q8TDY8 1250 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 GSDMAQ96QA5 445 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 CRACR2AQ9BSW2 395 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 SLC12A7Q9Y666 1083 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 KDM6AO15550 1401 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 IFNAR1P17181 557 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 ZAP70P43403 619 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 TRAPPC11Q7Z392 1133 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 ABCA3Q99758 1704 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 RGPD5Q99666 1765 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 B4E1Z4 1266 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 SHOX2O60902 331 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 LIFRP42702 1097 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 SWT1Q5T5J6 900 aaKnown RBP17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 NUP88Q99567 741 aaPredicted RBP17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 PLEKHA4Q9H4M7 779 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 LY9Q9HBG7 655 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 FBXO3Q9UK99 471 aa17.57■□□□□ 0.4
CACNA1A-235ENST00000637004 CDHR2Q9BYE9 1310 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 PSMD14O00487 310 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 CLGNO14967 610 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 N4BP3O15049 544 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 ABL1P00519 1130 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 SPAG1Q07617 926 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 MICALL1Q8N3F8 863 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 ANKRD20A12PQ8NF67 263 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 PUS3Q9BZE2 481 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 CSRNP2Q9H175 543 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 DENND2AQ9ULE3 1009 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 ARFGEF2Q9Y6D5 1785 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 APPP05067 770 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 PHKG2P15735 406 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 ADORA1P30542 326 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 CKAP4Q07065 602 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 FAM76AQ8TAV0 307 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 SENP2Q9HC62 589 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 PCDHB6Q9Y5E3 794 aa17.56■□□□□ 0.4
CACNA1A-235ENST00000637004 COL5A2P05997 1499 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms