RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 MARCH10Q8NA82 808 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 ACSBG1Q96GR2 724 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 SRRTQ9BXP5 876 aaKnown RBP18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 PRDM10Q9NQV6 1147 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 VPS54Q9P1Q0 977 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 PRDM4Q9UKN5 801 aa18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 PDS5AQ29RF7 1337 aaKnown RBP18.34■□□□□ 0.53
CHRNA7-221ENST00000636898 CASZ1Q86V15 1759 aa18.33■□□□□ 0.52
CHRNA7-221ENST00000636898 PDILTQ8N807 584 aa18.33■□□□□ 0.52
CHRNA7-221ENST00000636898 BAG1Q99933 345 aaPredicted RBP18.33■□□□□ 0.52
CHRNA7-221ENST00000636898 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.33■□□□□ 0.52
CHRNA7-221ENST00000636898 V9GYY5 206 aaPredicted RBP18.33■□□□□ 0.52
CHRNA7-221ENST00000636898 FBXO38Q6PIJ6 1188 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 USP49Q70CQ1 688 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 SH3RF1Q7Z6J0 888 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 ATP2B1P20020 1258 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 NR1I3Q14994 352 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 GRAMD1CQ8IYS0 662 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 FAM84BQ96KN1 310 aaPredicted RBP18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 MED15Q96RN5 788 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 DNAI1Q9UI46 699 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 V9GY48 417 aaPredicted RBP18.32■□□□□ 0.52
CHRNA7-221ENST00000636898 A0A0G2JS52 829 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 ORC4O43929 436 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 ZNF827Q17R98 1081 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 ERFEQ4G0M1 354 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 CTR9Q6PD62 1173 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 TMTC3Q6ZXV5 915 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 TC2NQ8N9U0 490 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 TNFRSF25Q93038 417 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 PPP2R2CQ9Y2T4 447 aa18.31■□□□□ 0.52
CHRNA7-221ENST00000636898 A0A1B0GTH6 734 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 PLEKHA8P1O95397 391 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 H2AFXP16104 143 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 DYNLL1P63167 89 aaKnown RBP18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 FBXO33Q7Z6M2 555 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 ZNF384Q8TF68 577 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 GSDMAQ96QA5 445 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 FAM53CQ9NYF3 392 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 LAMB1P07942 1786 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 EARS2Q5JPH6 523 aaKnown RBP18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 SLC10A5Q5PT55 438 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 DHX58Q96C10 678 aa18.3■□□□□ 0.52
CHRNA7-221ENST00000636898 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 VWA3AA6NCI4 1184 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 TRAPPC10P48553 1259 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 NPY5RQ15761 445 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 SPATA1Q5VX52 437 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 SYMPKQ92797 1274 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 NSUN4Q96CB9 384 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 PAGE5Q96GU1 130 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 EPSTI1Q96J88 318 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 SAMSN1Q9NSI8 373 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 A0A087X0B3 334 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 CYP2D7A0A087X1C5 515 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 ATP2C1P98194 919 aaPredicted RBP18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 GOLGA8FQ08AF8 430 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 GOLGA8DPQ0D2H9 430 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 CUL4BQ13620 913 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 ERCC6LQ2NKX8 1250 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 HSP90AA4PQ58FG1 418 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 PYM1Q9BRP8 204 aaKnown RBP18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 ATP8A2Q9NTI2 1148 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
CHRNA7-221ENST00000636898 TAF1P21675 1872 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 USP17L12C9JPN9 530 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 USP17L21D6R901 530 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 ZBTB22O15209 634 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 PRDM1O75626 825 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 NT5C2P49902 561 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 GABPB1Q06547 395 aaPredicted RBP18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 DPYDQ12882 1025 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 TTC38Q5R3I4 469 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 CTCFLQ8NI51 663 aaPredicted RBP18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 PKNOX2Q96KN3 472 aa18.28■□□□□ 0.52
CHRNA7-221ENST00000636898 BARGINQ6ZT62 677 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 APTXQ7Z2E3 356 aaKnown RBP18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 PANX2Q96RD6 677 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 CTAGE1Q96RT6 745 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 PARP3Q9Y6F1 533 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 MAST2Q6P0Q8 1798 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 SPATA31A5Q5VU36 1347 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 SPATA31A7Q8IWB4 1347 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 SYNRGQ9UMZ2 1314 aa18.27■□□□□ 0.52
CHRNA7-221ENST00000636898 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.51
CHRNA7-221ENST00000636898 PTPN21Q16825 1174 aa18.27■□□□□ 0.51
CHRNA7-221ENST00000636898 CDKAL1Q5VV42 579 aa18.27■□□□□ 0.51
CHRNA7-221ENST00000636898 DCP1AQ9NPI6 582 aaPredicted RBP18.27■□□□□ 0.51
CHRNA7-221ENST00000636898 KDM4FA0A1W2PPD8 638 aa18.26■□□□□ 0.51
CHRNA7-221ENST00000636898 FANCGO15287 622 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms