RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 RCSD1Q6JBY9 416 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 SLC10A4Q96EP9 437 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 CPVLQ9H3G5 476 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 CTNND1O60716 968 aaKnown RBP10.09□□□□□ -0.79
CDKL5-209ENST00000635828 TREML2Q5T2D2 321 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 STX8Q9UNK0 236 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 REC8O95072 547 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 HMGCS2P54868 508 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 RGMBQ6NW40 437 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 NOL8Q76FK4 1167 aaKnown RBP10.09□□□□□ -0.79
CDKL5-209ENST00000635828 TICAM2Q86XR7 235 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 MB21D2Q8IYB1 491 aaPredicted RBP10.09□□□□□ -0.79
CDKL5-209ENST00000635828 ZNF444Q8N0Y2 327 aaPredicted RBP10.09□□□□□ -0.79
CDKL5-209ENST00000635828 JAKMIP1Q96N16 626 aaKnown RBP10.09□□□□□ -0.79
CDKL5-209ENST00000635828 CLIP2Q9UDT6 1046 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 BAZ2BQ9UIF8 2168 aaKnown RBP10.09□□□□□ -0.79
CDKL5-209ENST00000635828 AFG3L2Q9Y4W6 797 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 CSADQ9Y600 493 aa10.09□□□□□ -0.79
CDKL5-209ENST00000635828 PDE4BQ07343 736 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 DEFB115Q30KQ5 88 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 AMOTL1Q8IY63 956 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 MS4A4AQ96JQ5 239 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 TSKSQ9UJT2 592 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 CD2BP2O95400 341 aaKnown RBP10.08□□□□□ -0.8
CDKL5-209ENST00000635828 TAL1P17542 331 aaPredicted RBP10.08□□□□□ -0.8
CDKL5-209ENST00000635828 CASTP20810 708 aaKnown RBP10.08□□□□□ -0.8
CDKL5-209ENST00000635828 MOGSQ13724 837 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 SAMD1Q6SPF0 538 aaPredicted RBP10.08□□□□□ -0.8
CDKL5-209ENST00000635828 WNK4Q96J92 1243 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 R3HDMLQ9H3Y0 253 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 SMCHD1A6NHR9 2005 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 LAMA2P24043 3122 aaKnown RBP10.08□□□□□ -0.8
CDKL5-209ENST00000635828 IGKV6D-41A0A0C4DH26 115 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 POTEEQ6S8J3 1075 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 DNAJC5GQ8N7S2 189 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 ENAHQ8N8S7 591 aaPredicted RBP10.08□□□□□ -0.8
CDKL5-209ENST00000635828 CAPNS2Q96L46 248 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
CDKL5-209ENST00000635828 SPRYD7Q5W111 196 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 EMILIN3Q9NT22 766 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 MTMR4Q9NYA4 1195 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 SWAP70Q9UH65 585 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 TNKSO95271 1327 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 SPDYE5A6NIY4 337 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 ICA1Q05084 483 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 CCDC144CPQ8IYA2 1237 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 CMTR1Q8N1G2 835 aaKnown RBP10.07□□□□□ -0.8
CDKL5-209ENST00000635828 PICK1Q9NRD5 415 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 RASSF10A6NK89 507 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 IGF2BP3O00425 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
CDKL5-209ENST00000635828 ORC4O43929 436 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 GOLGA8HP0CJ92 632 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 C22orf23Q9BZE7 217 aa10.07□□□□□ -0.8
CDKL5-209ENST00000635828 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 NEDD1Q8NHV4 660 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 IGDCC4Q8TDY8 1250 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 BRI3BPQ8WY22 251 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 KCNB2Q92953 911 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 NEK1Q96PY6 1258 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 ASNSP08243 561 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 SLC10A3P09131 477 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 SNAP25P60880 206 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 KIF23Q02241 960 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-209ENST00000635828 NOL9Q5SY16 702 aaKnown RBP10.06□□□□□ -0.8
CDKL5-209ENST00000635828 FBXO28Q9NVF7 368 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 USP17L5A8MUK1 530 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 PRC1O43663 620 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 CYP2C8P10632 490 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 SEC23AQ15436 765 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 TMEM179Q6ZVK1 233 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 ERO1BQ86YB8 467 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 ZNF280CQ8ND82 737 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 NCOA7Q8NI08 942 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 TMEM47Q9BQJ4 181 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 BRPF3Q9ULD4 1205 aa10.06□□□□□ -0.8
CDKL5-209ENST00000635828 FRMPD2Q68DX3 1309 aaPredicted RBP10.06□□□□□ -0.8
CDKL5-209ENST00000635828 WDR33Q9C0J8 1336 aaKnown RBP10.06□□□□□ -0.8
CDKL5-209ENST00000635828 ZSCAN10Q96SZ4 725 aaPredicted RBP10.05□□□□□ -0.8
CDKL5-209ENST00000635828 MCCP23508 829 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 FKBP1BP68106 108 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 CAP1Q01518 475 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 EXOSC10Q01780 885 aaKnown RBP10.05□□□□□ -0.8
CDKL5-209ENST00000635828 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 GADL1Q6ZQY3 521 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 KCTD1Q719H9 257 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 ESR2Q92731 530 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 CABP5Q9NP86 173 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 ZSWIM8A7E2V4 1837 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 USP17L2Q6R6M4 530 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
CDKL5-209ENST00000635828 LARGE1O95461 756 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 SLC3A2P08195 630 aaKnown RBP10.04□□□□□ -0.8
CDKL5-209ENST00000635828 SLC16A2P36021 539 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 BACE1P56817 501 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 TOB2Q14106 344 aaPredicted RBP10.04□□□□□ -0.8
CDKL5-209ENST00000635828 GPAT2Q6NUI2 795 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 Q6ZUG5 572 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 RALYLQ86SE5 291 aaKnown RBP10.04□□□□□ -0.8
CDKL5-209ENST00000635828 NBPF11Q86T75 865 aa10.04□□□□□ -0.8
CDKL5-209ENST00000635828 STAG2Q8N3U4 1231 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms