RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CCNL1Q9UK58 526 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 TTC4O95801 387 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 OCM2P0CE71 109 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 OCMP0CE72 109 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 HIBADHP31937 336 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 CYP26C1Q6V0L0 522 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 RNF10Q8N5U6 811 aaKnown RBP6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ACRBPQ8NEB7 543 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 SLC7A5P2Q9GIP4 190 aa6.13□□□□□ -1.43
SCN1A-209ENST00000635750 ELP1O95163 1332 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 BUB1BO60566 1050 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 FLOT1O75955 427 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 HPDP32754 393 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ECE1P42892 770 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TUBB2AQ13885 445 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 AKAP4Q5JQC9 854 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 EFCAB13Q8IY85 973 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TUBB2BQ9BVA1 445 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 HESX1Q9UBX0 185 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 PCDH11XQ9BZA7 1347 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 PCDH11YQ9BZA8 1340 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 GNA14O95837 355 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TBC1D8BQ0IIM8 1120 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ATL3Q6DD88 541 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 MCTP2Q6DN12 878 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 C8orf74Q6P047 294 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 SCYL2Q6P3W7 929 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 LMBR1LQ6UX01 489 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 LRGUKQ96M69 825 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NEUROG2Q9H2A3 272 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 JAG2Q9Y219 1238 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 FAN1Q9Y2M0 1017 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ZNF233A6NK53 670 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 EXOC3O60645 756 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 STX17P56962 302 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ARHGAP27Q6ZUM4 889 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 EXOC8Q8IYI6 725 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NDUFAF2Q8N183 169 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RBM46Q8TBY0 533 aaKnown RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RNF217Q8TC41 542 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 CHURC1Q8WUH1 139 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 CTTNBP2NLQ9P2B4 639 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TROVE2P10155 538 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 VSIG1Q86XK7 387 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 CCDC105Q8IYK2 499 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NECAB1Q8N987 351 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RHPN1Q8TCX5 695 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NUB1Q9Y5A7 615 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 CFTRP13569 1480 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 KDM3AQ9Y4C1 1321 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RHOXF2BP0C7M4 288 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 FAM160A1Q05DH4 1040 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TTC22Q5TAA0 569 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TBC1D9Q6ZT07 1266 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 PNMA8AQ86V59 439 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ELMOD1Q8N336 334 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 GRK7Q8WTQ7 553 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RHOXF2Q9BQY4 288 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RAB17Q9H0T7 212 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 FNDC3AQ9Y2H6 1198 aaKnown RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 TMEM247A6NEH6 219 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 A6NJR5 290 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NVLO15381 856 aaKnown RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ALDH1L1O75891 902 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 ADCY7P51828 1080 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RARSP54136 660 aaKnown RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 CCNA1P78396 465 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 PARP10Q53GL7 1025 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 FAM160B1Q5W0V3 765 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NSMFQ6X4W1 530 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 DPP9Q86TI2 863 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RIC8AQ9NPQ8 531 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 RAB20Q9NX57 234 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 OSBPP22059 807 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 PPARGP37231 505 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-209ENST00000635750 CASP2P42575 452 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 LIG4P49917 911 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 KSR2Q6VAB6 950 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 NME8Q8N427 588 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 EPS15L1Q9UBC2 864 aa6.12□□□□□ -1.43
SCN1A-209ENST00000635750 EFCAB14O75071 495 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 IFNA8P32881 189 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 KARSQ15046 597 aaKnown RBP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 ZNF174Q15697 407 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 PPIP5K2O43314 1243 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 ZSCAN20P17040 1043 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 DMP1Q13316 513 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 PUM3Q15397 648 aaKnown RBP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 ATP6V1E2Q96A05 226 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 SUCLA2Q9P2R7 463 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 TSKSQ9UJT2 592 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 ADGRL1O94910 1474 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 A0A1B0GUA9 196 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 GAS7O60861 476 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 DEXIO95424 95 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 CFBP00751 764 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 ELF1P32519 619 aa6.11□□□□□ -1.43
SCN1A-209ENST00000635750 SH3BGRP55822 239 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-209ENST00000635750 MTMR3Q13615 1198 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms