RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 C2orf27AQ580R0 203 aa8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 PRAMEF13Q5VWM6 474 aa8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 ANKRD34AQ69YU3 496 aa8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 EEPD1Q7L9B9 569 aa8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 KIAA0907Q7Z7F0 614 aaPredicted RBP8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 KCT2Q8NC54 265 aa8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 BAHD1Q8TBE0 780 aaPredicted RBP8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 THAP3Q8WTV1 239 aaPredicted RBP8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
SMARCA2-240ENST00000635392 KDM2BQ8NHM5 1336 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 SUSD5O60279 629 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 NCLP19338 710 aaKnown RBP8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 SLC7A5Q01650 507 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 GRIK4Q16099 956 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 SLC10A6Q3KNW5 377 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 GNPTABQ3T906 1256 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 CCDC74BQ96LY2 380 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 ACSS3Q9H6R3 686 aa8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 SUCOQ9UBS9 1254 aaKnown RBP8.86□□□□□ -0.99
SMARCA2-240ENST00000635392 ADCY3O60266 1144 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 CDC37L1Q7L3B6 337 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 SMYD4Q8IYR2 804 aaPredicted RBP8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 PHACTR4Q8IZ21 702 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 CYB5D2Q8WUJ1 264 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 LENG1Q96BZ8 264 aaPredicted RBP8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 DHRS1Q96LJ7 313 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 SLC6A18Q96N87 628 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 FOXQ1Q9C009 403 aa8.85□□□□□ -0.99
SMARCA2-240ENST00000635392 KRBA1A5PL33 1030 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 C9IYK1 514 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 CDC45O75419 566 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 PREPP48147 710 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 SSRP1Q08945 709 aaKnown RBP8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 FDX2Q6P4F2 183 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 ZNF513Q8N8E2 541 aaPredicted RBP8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 DNAJB8Q8NHS0 232 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 APPBP2Q92624 585 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 VWCEQ96DN2 955 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 GPATCH3Q96I76 525 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 PSMG3-AS1Q96PY0 264 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 EPN3Q9H201 632 aa8.84□□□□□ -0.99
SMARCA2-240ENST00000635392 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.83□□□□□ -1
SMARCA2-240ENST00000635392 PIK3R2O00459 728 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 RNGTTO60942 597 aaKnown RBP8.83□□□□□ -1
SMARCA2-240ENST00000635392 CAPNS1P04632 268 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 HMGB1P09429 215 aaKnown RBP8.83□□□□□ -1
SMARCA2-240ENST00000635392 FAM153BP0C7A2 387 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 PRRT3Q5FWE3 981 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 XP32Q5T750 250 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 ARMCX6Q7L4S7 300 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 HOMER1Q86YM7 354 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 UBL7Q96S82 380 aaPredicted RBP8.83□□□□□ -1
SMARCA2-240ENST00000635392 SPATA9Q9BWV2 254 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 AKTIPQ9H8T0 292 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 PCOLCE2Q9UKZ9 415 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 PTCH2Q9Y6C5 1203 aa8.83□□□□□ -1
SMARCA2-240ENST00000635392 LRIG2O94898 1065 aa8.82□□□□□ -1
SMARCA2-240ENST00000635392 COL8A1P27658 744 aa8.82□□□□□ -1
SMARCA2-240ENST00000635392 BBS9Q3SYG4 887 aa8.82□□□□□ -1
SMARCA2-240ENST00000635392 AXDND1Q5T1B0 1012 aaPredicted RBP8.82□□□□□ -1
SMARCA2-240ENST00000635392 CDPF1Q6NVV7 123 aa8.82□□□□□ -1
SMARCA2-240ENST00000635392 C16orf86Q6ZW13 317 aa8.82□□□□□ -1
SMARCA2-240ENST00000635392 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.82□□□□□ -1
SMARCA2-240ENST00000635392 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
SMARCA2-240ENST00000635392 PIDD1Q9HB75 910 aa8.82□□□□□ -1
SMARCA2-240ENST00000635392 NOP53Q9NZM5 478 aaKnown RBP8.82□□□□□ -1
SMARCA2-240ENST00000635392 CBFA2T2O43439 604 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 ITGB2P05107 769 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 GBP1P32455 592 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 ZNF143P52747 638 aaPredicted RBP8.81□□□□□ -1
SMARCA2-240ENST00000635392 TKFCQ3LXA3 575 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 SEZ6L2Q6UXD5 910 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 ZBTB38Q8NAP3 1195 aaPredicted RBP8.81□□□□□ -1
SMARCA2-240ENST00000635392 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
SMARCA2-240ENST00000635392 KLHL25Q9H0H3 589 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.81□□□□□ -1
SMARCA2-240ENST00000635392 CEP131Q9UPN4 1083 aa8.81□□□□□ -1
SMARCA2-240ENST00000635392 RBAK-RBAKDNI3L0D1 243 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 CLSTN1O94985 981 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 SPATA31C1P0DKV0 1188 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 NOS3P29474 1203 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 LONRF2Q1L5Z9 754 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 PLA2G4EQ3MJ16 856 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 NBPF12Q5TAG4 269 aaPredicted RBP8.8□□□□□ -1
SMARCA2-240ENST00000635392 TDRD10Q5VZ19 366 aaKnown RBP8.8□□□□□ -1
SMARCA2-240ENST00000635392 BEND7Q8N7W2 519 aaPredicted RBP8.8□□□□□ -1
SMARCA2-240ENST00000635392 MFSD2AQ8NA29 543 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 RIN3Q8TB24 985 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 SGSM3Q96HU1 749 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 HAUS7Q99871 368 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 SEMA6CQ9H3T2 930 aa8.8□□□□□ -1
SMARCA2-240ENST00000635392 A0A1W2PQU0 124 aa8.79□□□□□ -1
SMARCA2-240ENST00000635392 SHOXO15266 292 aa8.79□□□□□ -1
SMARCA2-240ENST00000635392 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
SMARCA2-240ENST00000635392 DYNC1LI2O43237 492 aaPredicted RBP8.79□□□□□ -1
SMARCA2-240ENST00000635392 CLEC3AO75596 197 aa8.79□□□□□ -1
SMARCA2-240ENST00000635392 SLITRK5O94991 958 aa8.79□□□□□ -1
SMARCA2-240ENST00000635392 TP53P04637 393 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms