RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CDH24Q86UP0 819 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 IRF2BP1Q8IU81 584 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 CREG2Q8IUH2 290 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 CCDC82Q8N4S0 544 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 XAGE3Q8WTP9 111 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 DACT3Q96B18 629 aaPredicted RBP4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 INTS4Q96HW7 963 aaKnown RBP4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 Q96M66 194 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 BCO2Q9BYV7 579 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 PCDHA4Q9UN74 947 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 AKAP2Q9Y2D5 859 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 ATAD2BQ9ULI0 1458 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 SMARCA2P51531 1590 aa4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 NXPE4Q6UWF7 544 aa4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 ZNF507Q8TCN5 953 aa4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 SERPINA10Q9UK55 444 aa4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 YBX2Q9Y2T7 364 aaKnown RBP4.46□□□□□ -1.7
SMARCB1-208ENST00000634926 PRAMEF27A3QJZ7 478 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 NOTOA8MTQ0 251 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 PSPNO60542 156 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 FBXO24O75426 580 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 TRIM37O94972 964 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 NEFLP07196 543 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 INSRRP14616 1297 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 SERPINB4P48594 390 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 EPHB3P54753 998 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 EFEMP1Q12805 493 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 ZXDCQ2QGD7 858 aaPredicted RBP4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 PRAMEF13Q5VWM6 474 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 EMILIN2Q9BXX0 1053 aa4.45□□□□□ -1.7
SMARCB1-208ENST00000634926 SLC22A31A6NKX4 558 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 H3BRB1 525 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 CAP2P40123 477 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 HNRNPUQ00839 825 aaKnown RBP eCLIP4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 TPTE2Q6XPS3 522 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 TMPRSS7Q7RTY8 843 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 KCT2Q8NC54 265 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 PDZD8Q8NEN9 1154 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 PLPPR2Q96GM1 343 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 WNT10AQ9GZT5 417 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 SLC6A17Q9H1V8 727 aa4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 TUT1Q9H6E5 874 aaKnown RBP4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 MBD1Q9UIS9 605 aaPredicted RBP4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 BAZ1AQ9NRL2 1556 aaPredicted RBP4.44□□□□□ -1.7
SMARCB1-208ENST00000634926 TPP2P29144 1249 aaPredicted RBP4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 TRIM26Q12899 539 aaPredicted RBP4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 PUM1Q14671 1186 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 TMEM132EQ6IEE7 984 aa4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 MFSD2AQ8NA29 543 aa4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 CCDC97Q96F63 343 aaPredicted RBP4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 DPH2Q9BQC3 489 aaPredicted RBP4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 PODXL2Q9NZ53 605 aa4.43□□□□□ -1.7
SMARCB1-208ENST00000634926 AKAP8O43823 692 aaKnown RBP4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 PRICKLE3O43900 615 aaPredicted RBP4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 SASH1O94885 1247 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 CST3P01034 146 aaPredicted RBP4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 XRCC5P13010 732 aaKnown RBP4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 PDE6BP35913 854 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 AFF3P51826 1226 aaKnown RBP4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 EGR3Q06889 387 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 LLGL2Q6P1M3 1020 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 TMEFF1Q8IYR6 380 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 ELMO3Q96BJ8 720 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 LAMC3Q9Y6N6 1575 aa4.42□□□□□ -1.7
SMARCB1-208ENST00000634926 NDUFB5O43674 189 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 PDIA4P13667 645 aaKnown RBP4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 PDE3BQ13370 1112 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 NR0B2Q15466 257 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 TMEM151BQ8IW70 566 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 SIRT2Q8IXJ6 389 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 LILRA2Q8N149 483 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 TP53I13Q8NBR0 393 aaPredicted RBP4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 GAL3ST3Q96A11 431 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 CNTD2Q9H8S5 307 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 CWC22Q9HCG8 908 aaKnown RBP4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 EGFL7Q9UHF1 273 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 PCDHA11Q9Y5I1 949 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 NESP48681 1621 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 KIF21AQ7Z4S6 1674 aa4.41□□□□□ -1.7
SMARCB1-208ENST00000634926 CELA3AP09093 270 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 SDHBP21912 280 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 KIR3DL1P43629 444 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 GLYCTKQ8IVS8 523 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 DNAJB8Q8NHS0 232 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 SIGLEC10Q96LC7 697 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 DUSP13Q9UII6 198 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 GPR160Q9UJ42 338 aa4.4□□□□□ -1.71
SMARCB1-208ENST00000634926 BAZ1BQ9UIG0 1483 aaKnown RBP4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 FITM1A5D6W6 292 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 RFXAPO00287 272 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 IRS4O14654 1257 aaPredicted RBP4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 SUV39H1O43463 412 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 LRRN2O75325 713 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 GRK4P32298 578 aa4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 ETF1P62495 437 aaKnown RBP4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 SRSF3P84103 164 aaKnown RBP4.39□□□□□ -1.71
SMARCB1-208ENST00000634926 HHIPL2Q6UWX4 724 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms