RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 MNX1P50219 401 aaPredicted RBP18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 CACNB2Q08289 660 aaPredicted RBP18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 CCL14Q16627 93 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 WDR78Q5VTH9 848 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 GPR142Q7Z601 462 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 SLC17A8Q8NDX2 589 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 OGDHLQ9ULD0 1010 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 SZT2Q5T011 3432 aa18.87■□□□□ 0.61
SNRNP48-203ENST00000634363 CCND3P30281 292 aaPredicted RBP18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 RGS2P41220 211 aa18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 MAP3K21Q5TCX8 1036 aa18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 PLEKHH3Q7Z736 793 aa18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 TRMT44Q8IYL2 757 aaKnown RBP18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 RHPN1Q8TCX5 695 aa18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 GDF15Q99988 308 aa18.86■□□□□ 0.61
SNRNP48-203ENST00000634363 CERKLQ49MI3 558 aaPredicted RBP18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 POTEEQ6S8J3 1075 aa18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 GTF3C2Q8WUA4 911 aaPredicted RBP18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 ANTXR1Q9H6X2 564 aa18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 IL1RAPL2Q9NP60 686 aa18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 SERPINB13Q9UIV8 391 aa18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L15C9J2P7 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L13C9JLJ4 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L11C9JVI0 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L18D6R9N7 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L22D6RA61 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L17D6RBQ6 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L19D6RCP7 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L20D6RJB6 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 IGSF3O75054 1194 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 BMP8BP34820 402 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP17L24Q0WX57 530 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 MAP3K12Q12852 859 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 MORN1Q5T089 497 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 TTC6Q86TZ1 520 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 AACSQ86V21 672 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 CLASRPQ8N2M8 674 aaKnown RBP18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 USP6NLQ92738 828 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 BCL11AQ9H165 835 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 CABP5Q9NP86 173 aa18.84■□□□□ 0.61
SNRNP48-203ENST00000634363 MAGEA10P43363 369 aaPredicted RBP18.83■□□□□ 0.6
SNRNP48-203ENST00000634363 ABCB5Q2M3G0 1257 aa18.83■□□□□ 0.6
SNRNP48-203ENST00000634363 TATDN1Q6P1N9 297 aa18.83■□□□□ 0.6
SNRNP48-203ENST00000634363 EDC3Q96F86 508 aaKnown RBP18.83■□□□□ 0.6
SNRNP48-203ENST00000634363 RABGAP1Q9Y3P9 1069 aa18.83■□□□□ 0.6
SNRNP48-203ENST00000634363 PFASO15067 1338 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 GLRX3O76003 335 aaKnown RBP18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 POLR3DP05423 398 aaPredicted RBP18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 USP14P54578 494 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 CCNA1P78396 465 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 MAP2K5Q13163 448 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 CERS3Q8IU89 383 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 EXOC6Q8TAG9 804 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 ACER1Q8TDN7 264 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 APBA2Q99767 749 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 LRRCC1Q9C099 1032 aa18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 UBE2OQ9C0C9 1292 aaKnown RBP18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 RANBP2P49792 3224 aaKnown RBP18.82■□□□□ 0.6
SNRNP48-203ENST00000634363 CNMDO75829 334 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 CNGA1P29973 690 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 PLCD1P51178 756 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 LHX8Q68G74 356 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 CATSPERGQ6ZRH7 1159 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 C12orf42Q96LP6 360 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
SNRNP48-203ENST00000634363 IFIT2P09913 472 aaKnown RBP18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 VCAM1P19320 739 aa18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 MFSD14CQ5VZR4 134 aa18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 KIAA1683Q9H0B3 1180 aa18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 EHD4Q9H223 541 aa18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 RPAP3Q9H6T3 665 aaPredicted RBP18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 IVNS1ABPQ9Y6Y0 642 aa18.8■□□□□ 0.6
SNRNP48-203ENST00000634363 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 DLL1O00548 723 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 MPHOSPH10O00566 681 aaKnown RBP18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 PTPREP23469 700 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 LRRC26Q2I0M4 334 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 TDHQ8IZJ6 230 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 DEFB123Q8N688 67 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 SENP6Q9GZR1 1112 aaPredicted RBP18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 FLRT1Q9NZU1 646 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 BTBD7Q9P203 1132 aa18.79■□□□□ 0.6
SNRNP48-203ENST00000634363 SLC15A5A6NIM6 579 aa18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 COL6A1P12109 1028 aa18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 SHMT1P34896 483 aa18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 MDM2Q00987 491 aaPredicted RBP18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 SEPT2Q15019 361 aa18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 Q7L0L9 218 aa18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 MCM9Q9NXL9 1143 aa18.78■□□□□ 0.6
SNRNP48-203ENST00000634363 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
SNRNP48-203ENST00000634363 SLC9C2Q5TAH2 1124 aa18.77■□□□□ 0.6
SNRNP48-203ENST00000634363 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
SNRNP48-203ENST00000634363 CRNKL1Q9BZJ0 848 aaKnown RBP18.77■□□□□ 0.6
SNRNP48-203ENST00000634363 ZBTB47Q9UFB7 747 aaPredicted RBP18.77■□□□□ 0.6
SNRNP48-203ENST00000634363 SPDYE16A6NNV3 312 aaPredicted RBP18.76■□□□□ 0.59
SNRNP48-203ENST00000634363 CYP2C19P33261 490 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms