RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, human

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01002-229	ENST00000633522	CCDC129	Q6ZRS4	1044 aa		13.8	□□□□□ -0.2
LINC01002-229	ENST00000633522	TOX2	Q96NM4	488 aa		13.8	□□□□□ -0.2
LINC01002-229	ENST00000633522	PAGR1	Q9BTK6	254 aa		13.8	□□□□□ -0.2
LINC01002-229	ENST00000633522	MTCH2	Q9Y6C9	303 aa		13.8	□□□□□ -0.2
LINC01002-229	ENST00000633522	COL4A4	P53420	1690 aa	Predicted RBP	13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	FOCAD	Q5VW36	1801 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	RIF1	Q5UIP0	2472 aa	Known RBP	13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	GRM8	O00222	908 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	NPM3	O75607	178 aa	Known RBP	13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	RHBDL3	P58872	404 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	ATP2B2	Q01814	1243 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	OLFML2B	Q68BL8	750 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	SLC44A5	Q8NCS7	719 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	STK31	Q9BXU1	1019 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	TMEM39A	Q9NV64	488 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	COG5	Q9UP83	839 aa		13.79	□□□□□ -0.2
LINC01002-229	ENST00000633522	PTPRZ1	P23471	2315 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	DNAH14	Q0VDD8	3507 aa		13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522		A0A1W2PQ45	241 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522		A0A1W2PQY0	241 aa		13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	PQBP1	O60828	265 aa	Known RBP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	FAM163A	Q96GL9	167 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	RABGAP1	Q9Y3P9	1069 aa		13.78	□□□□□ -0.2
LINC01002-229	ENST00000633522	ZBTB22	O15209	634 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	LDHB	P07195	334 aa	Known RBP	13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	FOXK2	Q01167	660 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	FKBP5	Q13451	457 aa	Predicted RBP	13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	METTL24	Q5JXM2	366 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	ZNF365	Q70YC5	407 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	MICALL1	Q8N3F8	863 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	ZNF384	Q8TF68	577 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	ANKS1A	Q92625	1134 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	SUCLG2	Q96I99	432 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	SLC28A3	Q9HAS3	691 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	EMILIN3	Q9NT22	766 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	MSRA	Q9UJ68	235 aa		13.77	□□□□□ -0.21
LINC01002-229	ENST00000633522	ROBO3	Q96MS0	1386 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	ZNF521	Q96K83	1311 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522		F6X3S4	739 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	CSF2RA	P15509	400 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	PICALM	Q13492	652 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	RABL6	Q3YEC7	729 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	KRT40	Q6A162	431 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	AS3MT	Q9HBK9	375 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	BTBD7	Q9P203	1132 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	ADAMTS8	Q9UP79	889 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	TECTA	O75443	2155 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	PARP14	Q460N5	1801 aa		13.76	□□□□□ -0.21
LINC01002-229	ENST00000633522	DMXL1	Q9Y485	3027 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	EPOP	A6NHQ4	379 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	C19orf81	C9J6K1	198 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	ST18	O60284	1047 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	ACR	P10323	421 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	PPIG	Q13427	754 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	PUM3	Q15397	648 aa	Known RBP	13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	PRAMEF19	Q5SWL8	479 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	LBX2	Q6XYB7	198 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	TSR2	Q969E8	191 aa	Known RBP	13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	DNAJC18	Q9H819	358 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	CACNA1G	O43497	2377 aa		13.75	□□□□□ -0.21
LINC01002-229	ENST00000633522	FAM186A	A6NE01	2351 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	ZNF292	O60281	2723 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	RFXAP	O00287	272 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	COBL	O75128	1261 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	GLRX3	O76003	335 aa	Known RBP	13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	MYOG	P15173	224 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	CCAR1	Q8IX12	1150 aa	Known RBP	13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	ANKRD44	Q8N8A2	993 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	VWCE	Q96DN2	955 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	PCGF6	Q9BYE7	350 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	TMOD4	Q9NZQ9	345 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	PTPRS	Q13332	1948 aa		13.74	□□□□□ -0.21
LINC01002-229	ENST00000633522	USP17L10	C9JJH3	530 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	ADAMTS4	O75173	837 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	IFIT1	P09914	478 aa	Known RBP	13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	SLC5A1	P13866	664 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	BTD	P43251	543 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	CDK7	P50613	346 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	SKIV2L	Q15477	1246 aa	Known RBP	13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	TWISTNB	Q3B726	338 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	FAM178B	Q8IXR5	827 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	KLHDC4	Q8TBB5	520 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	C12orf42	Q96LP6	360 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	PLXNA3	P51805	1871 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	BAHCC1	Q9P281	2608 aa		13.73	□□□□□ -0.21
LINC01002-229	ENST00000633522	CHD6	Q8TD26	2715 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	GVINP1	Q7Z2Y8	2422 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	GPR75-ASB3	A0A0A6YYF3	556 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	POTEB3	A0JP26	581 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	MYCN	P04198	464 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	ADORA2A	P29274	412 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	RABGGTB	P53611	331 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	CCNA1	P78396	465 aa		13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	CALD1	Q05682	793 aa	Known RBP	13.72	□□□□□ -0.21
LINC01002-229	ENST00000633522	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms