RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 GH2P01242 217 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 RARSP54136 660 aaKnown RBP24.67■■□□□ 1.54
TARDBP-228ENST00000629725 USP17L24Q0WX57 530 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 ZYXQ15942 572 aaKnown RBP24.67■■□□□ 1.54
TARDBP-228ENST00000629725 CCDC158Q5M9N0 1113 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 WDR78Q5VTH9 848 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 C12orf42Q96LP6 360 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 FAM161BQ96MY7 647 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 FEZ1Q99689 392 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 FLRT1Q9NZU1 646 aa24.67■■□□□ 1.54
TARDBP-228ENST00000629725 DDX20Q9UHI6 824 aaKnown RBP24.67■■□□□ 1.54
TARDBP-228ENST00000629725 MSCO60682 206 aa24.66■■□□□ 1.54
TARDBP-228ENST00000629725 CNMDO75829 334 aa24.66■■□□□ 1.54
TARDBP-228ENST00000629725 CYP2E1P05181 493 aaPredicted RBP24.66■■□□□ 1.54
TARDBP-228ENST00000629725 CNGA1P29973 690 aa24.66■■□□□ 1.54
TARDBP-228ENST00000629725 LPAR1Q92633 364 aa24.66■■□□□ 1.54
TARDBP-228ENST00000629725 PRKAG2Q9UGJ0 569 aa24.66■■□□□ 1.54
TARDBP-228ENST00000629725 SLC15A5A6NIM6 579 aa24.65■■□□□ 1.54
TARDBP-228ENST00000629725 PTPREP23469 700 aa24.65■■□□□ 1.54
TARDBP-228ENST00000629725 ATN1P54259 1190 aaPredicted RBP24.65■■□□□ 1.54
TARDBP-228ENST00000629725 IGSF3O75054 1194 aa24.64■■□□□ 1.54
TARDBP-228ENST00000629725 ATP2B2Q01814 1243 aa24.64■■□□□ 1.54
TARDBP-228ENST00000629725 CATSPERGQ6ZRH7 1159 aa24.64■■□□□ 1.54
TARDBP-228ENST00000629725 GPR108Q9NPR9 543 aa24.64■■□□□ 1.54
TARDBP-228ENST00000629725 IVNS1ABPQ9Y6Y0 642 aa24.64■■□□□ 1.54
TARDBP-228ENST00000629725 LTBP2Q14767 1821 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 DNM1LO00429 736 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 USP14P54578 494 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 DYNLL1P63167 89 aaKnown RBP24.63■■□□□ 1.53
TARDBP-228ENST00000629725 TNNI3KQ59H18 835 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 ZNF697Q5TEC3 545 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 TATDN1Q6P1N9 297 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 DBNDD2Q9BQY9 259 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 FPGT-TNNI3KV9GXZ4 949 aa24.63■■□□□ 1.53
TARDBP-228ENST00000629725 HOXC6P09630 235 aa24.62■■□□□ 1.53
TARDBP-228ENST00000629725 GRB14Q14449 540 aa24.62■■□□□ 1.53
TARDBP-228ENST00000629725 RAB3GAP1Q15042 981 aa24.62■■□□□ 1.53
TARDBP-228ENST00000629725 LBX2Q6XYB7 198 aa24.62■■□□□ 1.53
TARDBP-228ENST00000629725 RLFQ13129 1914 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 VCAM1P19320 739 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 CYP2C19P33261 490 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 ZAP70P43403 619 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 NPLOC4Q8TAT6 608 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 KIAA1683Q9H0B3 1180 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 BTBD7Q9P203 1132 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 SERPINB13Q9UIV8 391 aa24.61■■□□□ 1.53
TARDBP-228ENST00000629725 CYP7A1P22680 504 aa24.6■■□□□ 1.53
TARDBP-228ENST00000629725 USP5P45974 858 aa24.6■■□□□ 1.53
TARDBP-228ENST00000629725 RTP1P59025 263 aa24.6■■□□□ 1.53
TARDBP-228ENST00000629725 CERKLQ49MI3 558 aaPredicted RBP24.6■■□□□ 1.53
TARDBP-228ENST00000629725 ZNF512BQ96KM6 892 aaPredicted RBP24.6■■□□□ 1.53
TARDBP-228ENST00000629725 PIH1D3Q9NQM4 214 aaKnown RBP24.6■■□□□ 1.53
TARDBP-228ENST00000629725 IPO8O15397 1037 aaKnown RBP24.59■■□□□ 1.53
TARDBP-228ENST00000629725 TRIM27P14373 513 aa24.59■■□□□ 1.53
TARDBP-228ENST00000629725 OS9Q13438 667 aaPredicted RBP24.59■■□□□ 1.53
TARDBP-228ENST00000629725 CERS3Q8IU89 383 aa24.59■■□□□ 1.53
TARDBP-228ENST00000629725 EHD4Q9H223 541 aa24.59■■□□□ 1.53
TARDBP-228ENST00000629725 ATP11BQ9Y2G3 1177 aa24.59■■□□□ 1.53
TARDBP-228ENST00000629725 ABCB5Q2M3G0 1257 aa24.58■■□□□ 1.53
TARDBP-228ENST00000629725 GJC2Q5T442 439 aaPredicted RBP24.58■■□□□ 1.53
TARDBP-228ENST00000629725 MIGA1Q8NAN2 632 aa24.58■■□□□ 1.53
TARDBP-228ENST00000629725 ARRDC4Q8NCT1 418 aa24.58■■□□□ 1.53
TARDBP-228ENST00000629725 TRPV1Q8NER1 839 aa24.58■■□□□ 1.53
TARDBP-228ENST00000629725 ACER1Q8TDN7 264 aa24.58■■□□□ 1.53
TARDBP-228ENST00000629725 SPDYE16A6NNV3 312 aaPredicted RBP24.57■■□□□ 1.52
TARDBP-228ENST00000629725 IDH1O75874 414 aaKnown RBP24.57■■□□□ 1.52
TARDBP-228ENST00000629725 CYBAP13498 195 aa24.57■■□□□ 1.52
TARDBP-228ENST00000629725 DPP9Q86TI2 863 aa24.57■■□□□ 1.52
TARDBP-228ENST00000629725 RPAP3Q9H6T3 665 aaPredicted RBP24.57■■□□□ 1.52
TARDBP-228ENST00000629725 CABP5Q9NP86 173 aa24.57■■□□□ 1.52
TARDBP-228ENST00000629725 SHHQ15465 462 aa24.56■■□□□ 1.52
TARDBP-228ENST00000629725 SLC39A5Q6ZMH5 540 aa24.56■■□□□ 1.52
TARDBP-228ENST00000629725 TTC6Q86TZ1 520 aa24.56■■□□□ 1.52
TARDBP-228ENST00000629725 CDX2Q99626 313 aaPredicted RBP24.56■■□□□ 1.52
TARDBP-228ENST00000629725 TNNQ9UQP3 1299 aa24.56■■□□□ 1.52
TARDBP-228ENST00000629725 MUC3AQ02505 3323 aa24.56■■□□□ 1.52
TARDBP-228ENST00000629725 KBTBD13C9JR72 458 aa24.55■■□□□ 1.52
TARDBP-228ENST00000629725 IGHA2P01877 340 aa24.55■■□□□ 1.52
TARDBP-228ENST00000629725 POLA2Q14181 598 aa24.55■■□□□ 1.52
TARDBP-228ENST00000629725 FRAT1Q92837 279 aaPredicted RBP24.55■■□□□ 1.52
TARDBP-228ENST00000629725 CLUAP1Q96AJ1 413 aa24.55■■□□□ 1.52
TARDBP-228ENST00000629725 PRDM5Q9NQX1 630 aaPredicted RBP24.55■■□□□ 1.52
TARDBP-228ENST00000629725 ZNF236Q9UL36 1845 aa24.55■■□□□ 1.52
TARDBP-228ENST00000629725 STRNO43815 780 aa24.54■■□□□ 1.52
TARDBP-228ENST00000629725 SURF6O75683 361 aaKnown RBP24.54■■□□□ 1.52
TARDBP-228ENST00000629725 ADORA2AP29274 412 aa24.54■■□□□ 1.52
TARDBP-228ENST00000629725 OLFML2BQ68BL8 750 aa24.54■■□□□ 1.52
TARDBP-228ENST00000629725 MAGEB6Q8N7X4 407 aa24.54■■□□□ 1.52
TARDBP-228ENST00000629725 SEMA6BQ9H3T3 888 aa24.54■■□□□ 1.52
TARDBP-228ENST00000629725 DBNLQ9UJU6 430 aaKnown RBP24.54■■□□□ 1.52
TARDBP-228ENST00000629725 C9orf50Q5SZB4 431 aa24.53■■□□□ 1.52
TARDBP-228ENST00000629725 ANO1Q5XXA6 986 aa24.53■■□□□ 1.52
TARDBP-228ENST00000629725 MAFAQ8NHW3 353 aaPredicted RBP24.53■■□□□ 1.52
TARDBP-228ENST00000629725 SSH3Q8TE77 659 aa24.53■■□□□ 1.52
TARDBP-228ENST00000629725 MYCNP04198 464 aaPredicted RBP24.52■■□□□ 1.52
TARDBP-228ENST00000629725 SHMT1P34896 483 aa24.52■■□□□ 1.52
TARDBP-228ENST00000629725 COG2Q14746 738 aa24.52■■□□□ 1.52
TARDBP-228ENST00000629725 BADQ92934 168 aa24.52■■□□□ 1.52
TARDBP-228ENST00000629725 MOV10L1Q9BXT6 1211 aaKnown RBP24.52■■□□□ 1.52
TARDBP-228ENST00000629725 HOXC10Q9NYD6 342 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms