RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SHC4Q6S5L8 630 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 CCDC84Q86UT8 332 aaPredicted RBP8.56□□□□□ -1.04
PKP4-217ENST00000628904 WDR66Q8TBY9 1149 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
PKP4-217ENST00000628904 HINFPQ9BQA5 517 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 TNS2Q63HR2 1409 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 C21orf2O43822 256 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 STAT6P42226 847 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 SLC39A14Q15043 492 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 MIGA2Q7L4E1 593 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 CCDC112Q8NEF3 446 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 DESI2Q9BSY9 194 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 RTEL1Q9NZ71 1219 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 SLIT3O75094 1523 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 RGPD1P0DJD0 1748 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 DCCP43146 1447 aa8.56□□□□□ -1.04
PKP4-217ENST00000628904 MROH7-TTC4A0A0A0MT08 1334 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 URI1O94763 535 aaPredicted RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 CACNB1Q02641 598 aaPredicted RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 GRAPQ13588 217 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 VPS72Q15906 364 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 UVSSAQ2YD98 709 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 TBC1D10BQ4KMP7 808 aaPredicted RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 SRBD1Q8N5C6 995 aaKnown RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 GRAPLQ8TC17 118 aaPredicted RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 SORBS3O60504 671 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 MMP1P03956 469 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 NAP1L1P55209 391 aaKnown RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 FANCCQ00597 558 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 SKIDA1Q1XH10 827 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 KCNB2Q92953 911 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 LZTFL1Q9NQ48 299 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 SAMSN1Q9NSI8 373 aaKnown RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 ATF5Q9Y2D1 282 aaPredicted RBP8.55□□□□□ -1.04
PKP4-217ENST00000628904 XDHP47989 1333 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 USP27XA6NNY8 438 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 OFD1O75665 1012 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 TPM3P06753 285 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 TECP42680 631 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 PIGSQ96S52 555 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 MMRN2Q9H8L6 949 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 RIC1Q4ADV7 1423 aa8.55□□□□□ -1.04
PKP4-217ENST00000628904 FMNL1O95466 1100 aaPredicted RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 PARP1P09874 1014 aaKnown RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 IFNAR1P17181 557 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 ZNF76P36508 570 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SP4Q02446 784 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 POSTNQ15063 836 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 RILPL1Q5EBL4 403 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SYT10Q6XYQ8 523 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 C2CD5Q86YS7 1000 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.54□□□□□ -1.041e-6■■■■■ 86
PKP4-217ENST00000628904 POLLQ9UGP5 575 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 DNAI1Q9UI46 699 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 CTNND2Q9UQB3 1225 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 ELP1O95163 1332 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SMTNL1A8MU46 457 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 N4BP3O15049 544 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SNW1Q13573 536 aaKnown RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 UBE2SQ16763 222 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 MAEAQ7L5Y9 396 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 PPFIBP1Q86W92 1011 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 HPS3Q969F9 1004 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 HOMER2Q9NSB8 354 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 ZBTB12Q9Y330 459 aaPredicted RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 SMCO2A6NFE2 343 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 WNT7AO00755 349 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 PLS1Q14651 629 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SHROOM1Q2M3G4 852 aaPredicted RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 FMR1NBQ8N0W7 255 aaPredicted RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 TMEM87AQ8NBN3 555 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.54□□□□□ -1.04
PKP4-217ENST00000628904 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 TMEM260Q9NX78 707 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 ZBTB21Q9ULJ3 1066 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 USP17L5A8MUK1 530 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 RIOK3O14730 519 aaKnown RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 CHMP2AO43633 222 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 YEATS4O95619 227 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SCG2P13521 617 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 GYS1P13807 737 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 ASIC1P78348 528 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 SF3B3Q15393 1217 aaKnown RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 SLC30A10Q6XR72 485 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 PPP4R3CPQ6ZMV5 832 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 DPF2Q92785 391 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 CEP95Q96GE4 821 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 RIOK1Q9BRS2 568 aaKnown RBP8.54□□□□□ -1.04
PKP4-217ENST00000628904 KCNF1Q9H3M0 494 aa8.54□□□□□ -1.04
PKP4-217ENST00000628904 PPIP5K2O43314 1243 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 CALM1P0DP23 149 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 CALM2P0DP24 149 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 CALM3P0DP25 149 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms