RNA–Protein interactions for RNA: ENST00000628881.1

PFDN5-220, Transcript of prefoldin subunit 5, humanhuman

TSL 3 BASIC

Gene PFDN5, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-220ENST00000628881 ZNF296Q8WUU4 475 aaPredicted RBP16.28■□□□□ 0.2
PFDN5-220ENST00000628881 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
PFDN5-220ENST00000628881 TLR2O60603 784 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 FKTNO75072 461 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 FGAP02671 866 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 RASA1P20936 1047 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 CHMLP26374 656 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 PDE4BQ07343 736 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 DGKZQ13574 1117 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 FEZ1Q99689 392 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 ANAPC4Q9UJX5 808 aa16.27■□□□□ 0.2
PFDN5-220ENST00000628881 GREB1LQ9C091 1923 aaPredicted RBP16.27■□□□□ 0.19
PFDN5-220ENST00000628881 ADGRA2Q96PE1 1338 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 USP14P54578 494 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 ICA1Q05084 483 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 PABPC4Q13310 644 aaKnown RBP eCLIP16.26■□□□□ 0.192e-12■■■■■ 29.6
PFDN5-220ENST00000628881 BMP2KLQ5H9B9 411 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 ACER1Q8TDN7 264 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 EMILIN3Q9NT22 766 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
PFDN5-220ENST00000628881 PRDM1O75626 825 aa16.25■□□□□ 0.19
PFDN5-220ENST00000628881 CTDSPL2Q05D32 466 aa16.25■□□□□ 0.19
PFDN5-220ENST00000628881 ZNF444Q8N0Y2 327 aaPredicted RBP16.25■□□□□ 0.19
PFDN5-220ENST00000628881 DSCC1Q9BVC3 393 aa16.25■□□□□ 0.19
PFDN5-220ENST00000628881 IL25Q9H293 177 aa16.25■□□□□ 0.19
PFDN5-220ENST00000628881 A0A1W2PRG0 241 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 CYP2C8P10632 490 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 SP3Q02447 781 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 ZYXQ15942 572 aaKnown RBP16.24■□□□□ 0.19
PFDN5-220ENST00000628881 C17orf99Q6UX52 265 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 CLEC10AQ8IUN9 316 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.24■□□□□ 0.19
PFDN5-220ENST00000628881 SH2D4AQ9H788 454 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 KANSL2Q9H9L4 492 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 ARHGEF10LQ9HCE6 1279 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
PFDN5-220ENST00000628881 PLIN4Q96Q06 1357 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
PFDN5-220ENST00000628881 OSBPP22059 807 aa16.23■□□□□ 0.19
PFDN5-220ENST00000628881 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
PFDN5-220ENST00000628881 SIAH1Q8IUQ4 282 aa16.23■□□□□ 0.19
PFDN5-220ENST00000628881 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
PFDN5-220ENST00000628881 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 SGSM2O43147 1006 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 ORC4O43929 436 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 FGRP09769 529 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
PFDN5-220ENST00000628881 HAND2P61296 217 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 CTU1Q7Z7A3 348 aaKnown RBP16.22■□□□□ 0.19
PFDN5-220ENST00000628881 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
PFDN5-220ENST00000628881 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
PFDN5-220ENST00000628881 CPA4Q9UI42 421 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 TMX2Q9Y320 296 aa16.22■□□□□ 0.19
PFDN5-220ENST00000628881 TSPY3P0CV98 308 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 TSPY8P0CW00 308 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 BCRP11274 1271 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
PFDN5-220ENST00000628881 VCAM1P19320 739 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.19
PFDN5-220ENST00000628881 ATP2B2Q01814 1243 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 FAM47AQ5JRC9 791 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 NEDD1Q8NHV4 660 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 CD99L2Q8TCZ2 262 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 LPAR1Q92633 364 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.19
PFDN5-220ENST00000628881 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 ZNF213O14771 459 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 GCLCP48506 637 aaPredicted RBP16.2■□□□□ 0.18
PFDN5-220ENST00000628881 TFAP4Q01664 338 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 AKNAD1Q5T1N1 836 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 TNS4Q8IZW8 715 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 STAG1Q8WVM7 1258 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
PFDN5-220ENST00000628881 INCENPQ9NQS7 918 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 NYAP2Q9P242 653 aa16.2■□□□□ 0.18
PFDN5-220ENST00000628881 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
PFDN5-220ENST00000628881 LACTBP83111 547 aaPredicted RBP16.19■□□□□ 0.18
PFDN5-220ENST00000628881 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
PFDN5-220ENST00000628881 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 MFSD6Q6ZSS7 791 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 TBC1D10CQ8IV04 446 aa16.19■□□□□ 0.18
PFDN5-220ENST00000628881 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms