RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 CYB5R4Q7L1T6 521 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 CHST3Q7LGC8 479 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 GBP4Q96PP9 640 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 LRRC2Q9BYS8 371 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 DDX4Q9NQI0 724 aaKnown RBP11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 FAM198AQ9UFP1 575 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 HACL1Q9UJ83 578 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 STX8Q9UNK0 236 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
FOXCUT-201ENST00000628509 MPHOSPH10O00566 681 aaKnown RBP11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 NFIAQ12857 509 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 STK3Q13188 491 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 ZNF654Q8IZM8 581 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 SPRYD3Q8NCJ5 442 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 DYNLL2Q96FJ2 89 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 ARHGEF10LQ9HCE6 1279 aa11.82□□□□□ -0.52
FOXCUT-201ENST00000628509 NID2Q14112 1375 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 H3BQV1 296 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 ASNSP08243 561 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 CLCN6P51797 869 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 CACNB3P54284 484 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 SSRP1Q08945 709 aaKnown RBP11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 TRAF1Q13077 416 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 RASA3Q14644 834 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 SEC23AQ15436 765 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 ABCB5Q2M3G0 1257 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 TBC1D10BQ4KMP7 808 aaPredicted RBP11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 FAM47AQ5JRC9 791 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 IFFO2Q5TF58 517 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 MICU3Q86XE3 530 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 ENAHQ8N8S7 591 aaPredicted RBP11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 FANCBQ8NB91 859 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 NUP133Q8WUM0 1156 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 SCN4AP35499 1836 aa11.81□□□□□ -0.52
FOXCUT-201ENST00000628509 DDTLA6NHG4 134 aaPredicted RBP11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 DDNO94850 711 aaPredicted RBP11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 SMARCA1P28370 1054 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 GJB2P29033 226 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 SCRN1Q12765 414 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 CSPP1Q1MSJ5 1256 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 SLC4A8Q2Y0W8 1093 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 NBPF9Q3BBW0 867 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 LARP1BQ659C4 914 aaKnown RBP11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 RCSD1Q6JBY9 416 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 USP48Q86UV5 1035 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 PNMA1Q8ND90 353 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 ZKSCAN3Q9BRR0 538 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 ZNF341Q9BYN7 854 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 NYAP2Q9P242 653 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 STK36Q9NRP7 1315 aa11.8□□□□□ -0.52
FOXCUT-201ENST00000628509 ADAMTSL1Q8N6G6 1762 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 IFNAR1P17181 557 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 SHMT1P34896 483 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 CCT2P78371 535 aaKnown RBP11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 GPATCH4Q5T3I0 446 aaKnown RBP11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 ANGEL2Q5VTE6 544 aaKnown RBP11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 NECAB1Q8N987 351 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 RNF26Q9BY78 433 aaPredicted RBP11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 DEFB129Q9H1M3 183 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
FOXCUT-201ENST00000628509 PTPDC1A2A3K4 754 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 STX6O43752 255 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 PPP1R12BO60237 982 aaPredicted RBP11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 DEXIO95424 95 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 PARP1P09874 1014 aaKnown RBP11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 EPHX2P34913 555 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 PRELPP51888 382 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 MAP3K10Q02779 954 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 ICA1Q05084 483 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 SAFBQ15424 915 aaKnown RBP eCLIP11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 SMARCC2Q8TAQ2 1214 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 CCDC12Q8WUD4 166 aaPredicted RBP11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 ZSCAN16Q9H4T2 348 aaPredicted RBP11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 BRMS1Q9HCU9 246 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 GOPCQ9HD26 462 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 INCENPQ9NQS7 918 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 GGA3Q9NZ52 723 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 BRPF3Q9ULD4 1205 aa11.78□□□□□ -0.52
FOXCUT-201ENST00000628509 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 EPS15P42566 896 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 NOVP48745 357 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 GNL2Q13823 731 aaKnown RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 MKL1Q969V6 931 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
FOXCUT-201ENST00000628509 TMEM39BQ9GZU3 492 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms